Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:171644439-171694511

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slamf7 1 171632403 to 171653035 20632 - protein coding gene SLAM family member 7
Tssr15107 1 171645881 to 171645894 13 - TSS region transcription start site region 15107
Tssr15108 1 171645950 to 171645973 23 - TSS region transcription start site region 15108
Tssr15109 1 171646411 to 171646423 12 - TSS region transcription start site region 15109
Tssr15110 1 171648364 to 171648377 13 - TSS region transcription start site region 15110
Tssr15111 1 171648388 to 171648401 13 - TSS region transcription start site region 15111
Tssr15112 1 171648503 to 171648512 9 - TSS region transcription start site region 15112
Tssr15113 1 171648945 to 171648988 43 - TSS region transcription start site region 15113
Tssr15114 1 171649002 to 171649012 10 - TSS region transcription start site region 15114
Tssr15115 1 171652873 to 171652884 11 - TSS region transcription start site region 15115
Tssr15116 1 171652923 to 171652932 9 - TSS region transcription start site region 15116
n-THatg1 1 171669439 to 171669511 72 + tRNA gene nuclear encoded tRNA histidine 1 (anticodon ATG)
A630035G10Rik 1 171676684 to 171681980 5296 - unclassified gene RIKEN cDNA A630035G10 gene
Gm37981 1 171679336 to 171679870 534 - pseudogene predicted gene, 37981
Cpgi1030 1 171679709 to 171680026 317 CpG island CpG island 1030
Tssr10078 1 171681991 to 171681992 1 + TSS region transcription start site region 10078
Tssr10079 1 171682004 to 171682071 67 + TSS region transcription start site region 10079
Cd48 1 171682009 to 171705258 23249 + protein coding gene CD48 antigen
Tssr10080 1 171682077 to 171682092 15 + TSS region transcription start site region 10080
Gm37010 1 171688311 to 171690014 1703 + unclassified gene predicted gene, 37010