Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:171635405-171815638

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scgq2 1 147249520 to 171804689 24555169 QTL spontaneous crescentic glomerulonephritis QTL 2
Nktcn1 1 168358674 to 171804689 3446015 QTL natural killer T cell numbers 1
Slamf7 1 171632403 to 171653035 20632 - protein coding gene SLAM family member 7
Gm37787 1 171634879 to 171636022 1143 + antisense lncRNA gene predicted gene, 37787
Tssr15086 1 171636340 to 171636380 40 - TSS region transcription start site region 15086
Tssr15087 1 171636666 to 171636691 25 - TSS region transcription start site region 15087
Tssr15088 1 171637179 to 171637188 9 - TSS region transcription start site region 15088
Tssr15089 1 171637241 to 171637268 27 - TSS region transcription start site region 15089
Tssr15090 1 171637323 to 171637337 14 - TSS region transcription start site region 15090
Tssr15091 1 171637346 to 171637378 32 - TSS region transcription start site region 15091
Tssr15092 1 171638717 to 171638736 19 - TSS region transcription start site region 15092
Tssr15093 1 171638747 to 171638761 14 - TSS region transcription start site region 15093
Tssr15094 1 171638765 to 171638776 11 - TSS region transcription start site region 15094
Tssr10077 1 171638991 to 171639039 48 + TSS region transcription start site region 10077
Tssr15095 1 171639017 to 171639044 27 - TSS region transcription start site region 15095
Tssr15096 1 171639060 to 171639074 14 - TSS region transcription start site region 15096
Tssr15097 1 171639166 to 171639177 11 - TSS region transcription start site region 15097
Tssr15098 1 171639247 to 171639258 11 - TSS region transcription start site region 15098
Tssr15099 1 171639526 to 171639567 41 - TSS region transcription start site region 15099
Tssr15100 1 171639628 to 171639631 3 - TSS region transcription start site region 15100
Tssr15101 1 171641020 to 171641036 16 - TSS region transcription start site region 15101
Tssr15102 1 171641059 to 171641086 27 - TSS region transcription start site region 15102
Tssr15103 1 171641114 to 171641127 13 - TSS region transcription start site region 15103
Tssr15104 1 171641155 to 171641168 13 - TSS region transcription start site region 15104
Tssr15105 1 171641173 to 171641180 7 - TSS region transcription start site region 15105
Mir7683 1 171641840 to 171641900 60 - miRNA gene microRNA 7683
Tssr15106 1 171643348 to 171643375 27 - TSS region transcription start site region 15106
Tssr15107 1 171645881 to 171645894 13 - TSS region transcription start site region 15107
Tssr15108 1 171645950 to 171645973 23 - TSS region transcription start site region 15108
Tssr15109 1 171646411 to 171646423 12 - TSS region transcription start site region 15109
Tssr15110 1 171648364 to 171648377 13 - TSS region transcription start site region 15110
Tssr15111 1 171648388 to 171648401 13 - TSS region transcription start site region 15111
Tssr15112 1 171648503 to 171648512 9 - TSS region transcription start site region 15112
Tssr15113 1 171648945 to 171648988 43 - TSS region transcription start site region 15113
Tssr15114 1 171649002 to 171649012 10 - TSS region transcription start site region 15114
Tssr15115 1 171652873 to 171652884 11 - TSS region transcription start site region 15115
Tssr15116 1 171652923 to 171652932 9 - TSS region transcription start site region 15116
n-THatg1 1 171669439 to 171669511 72 + tRNA gene nuclear encoded tRNA histidine 1 (anticodon ATG)
A630035G10Rik 1 171676684 to 171681980 5296 - unclassified gene RIKEN cDNA A630035G10 gene
Gm37981 1 171679336 to 171679870 534 - pseudogene predicted gene, 37981
Cpgi1030 1 171679709 to 171680026 317 CpG island CpG island 1030
Tssr10078 1 171681991 to 171681992 1 + TSS region transcription start site region 10078
Tssr10079 1 171682004 to 171682071 67 + TSS region transcription start site region 10079
Cd48 1 171682009 to 171705258 23249 + protein coding gene CD48 antigen
Tssr10080 1 171682077 to 171682092 15 + TSS region transcription start site region 10080
Gm37010 1 171688311 to 171690014 1703 + unclassified gene predicted gene, 37010
Tssr10081 1 171695889 to 171695907 18 + TSS region transcription start site region 10081
Tma7-ps 1 171711088 to 171711282 194 + pseudogene translational machinery associated 7 homolog (S. cerevisiae), pseudogene
Tssr10082 1 171712914 to 171712924 10 + TSS region transcription start site region 10082
Gm37693 1 171725405 to 171725638 233 - pseudogene predicted gene, 37693
Gm19030 1 171729915 to 171730466 551 + pseudogene predicted gene, 19030
Gm26412 1 171732060 to 171732114 54 - snRNA gene predicted gene, 26412
Gm22950 1 171733299 to 171733405 106 - snRNA gene predicted gene, 22950
Tssr10083 1 171762925 to 171762966 41 + TSS region transcription start site region 10083
Tssr10084 1 171766895 to 171766913 18 + TSS region transcription start site region 10084
Tssr10085 1 171766925 to 171766941 16 + TSS region transcription start site region 10085
Tssr10086 1 171767123 to 171767138 15 + TSS region transcription start site region 10086
Slamf1 1 171767132 to 171801184 34052 + protein coding gene signaling lymphocytic activation molecule family member 1
Tssr10087 1 171767144 to 171767170 26 + TSS region transcription start site region 10087
Tssr15117 1 171770938 to 171770946 8 - TSS region transcription start site region 15117
Tssr10088 1 171775159 to 171775162 3 + TSS region transcription start site region 10088
Tssr10089 1 171775364 to 171775372 8 + TSS region transcription start site region 10089
Tssr10090 1 171777176 to 171777187 11 + TSS region transcription start site region 10090
Tssr10091 1 171778598 to 171778639 41 + TSS region transcription start site region 10091
Tssr10092 1 171787979 to 171787985 6 + TSS region transcription start site region 10092
Tssr10093 1 171799615 to 171799627 12 + TSS region transcription start site region 10093
Tssr10094 1 171800456 to 171800467 11 + TSS region transcription start site region 10094
Scfr1 1 171804480 to 189571420 17766940 QTL stem cell frequency regulator 1
Emrq1 1 171804480 to 172888802 1084322 QTL emotional reactivity QTL 1
D1Mit113 1 171804480 to 171804689 209 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 113
Mptp1 1 171804480 to 192998742 21194262 QTL MPTP sensitivity 1