Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:171087371-171117442

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr14978 1 171089980 to 171089989 9 - TSS region transcription start site region 14978
Tssr14979 1 171101117 to 171101118 1 - TSS region transcription start site region 14979
Cpgi1008 1 171101828 to 171102879 1051 CpG island CpG island 1008
n-TLcag9 1 171101838 to 171101920 82 - tRNA gene nuclear encoded tRNA leucine 9 (anticodon CAG)
n-TDgtc5 1 171102371 to 171102442 71 + tRNA gene nuclear encoded tRNA aspartic acid 5 (anticodon GTC)
n-TGtcc3 1 171102756 to 171102827 71 + tRNA gene nuclear encoded tRNA glycine 3 (anticodon TCC)
n-TEctc6 1 171103043 to 171103114 71 + tRNA gene nuclear encoded tRNA glutamic acid 6 (anticodon CTC)
Cpgi1009 1 171110931 to 171111186 255 CpG island CpG island 1009
n-TVcac6 1 171111443 to 171111515 72 + tRNA gene nuclear encoded tRNA valine 6 (anticodon CAC)
Cpgi1010 1 171113827 to 171114265 438 CpG island CpG island 1010
Cfap126 1 171113918 to 171126967 13049 + protein coding gene cilia and flagella associated protein 126
Tssr14980 1 171113945 to 171113954 9 - TSS region transcription start site region 14980
Tssr9962 1 171113977 to 171114048 71 + TSS region transcription start site region 9962
Tssr9963 1 171114196 to 171114200 4 + TSS region transcription start site region 9963