Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:171059840-171099901

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(1Fcgr2b-Fcgr3)1Vlcg 1 170960558 to 171064935 104377 chromosomal deletion deletion, Chr1, Regeneron Pharmaceuticals
Del(1Fcgr2b-Fcgr3)1Rav 1 170960558 to 171064935 104377 chromosomal deletion deletion, Chr 1, Jeffrey V Ravetch 1
Fcgr3 1 171051174 to 171064935 13761 - protein coding gene Fc receptor, IgG, low affinity III
Cpgi1005 1 171063753 to 171064053 300 CpG island CpG island 1005
n-TEctc5 1 171064164 to 171064235 71 - tRNA gene nuclear encoded tRNA glutamic acid 5 (anticodon CTC)
Mir6546 1 171064591 to 171064652 61 - miRNA gene microRNA 6546
n-TGtcc1 1 171064699 to 171064770 71 - tRNA gene nuclear encoded tRNA glycine 1 (anticodon TCC)
n-TDgtc3 1 171065358 to 171065429 71 - tRNA gene nuclear encoded tRNA aspartic acid 3 (anticodon GTC)
n-TLcag6 1 171065984 to 171066066 82 + tRNA gene nuclear encoded tRNA leucine 6 (anticodon CAG)
n-TGgcc12 1 171066631 to 171066701 70 + tRNA gene nuclear encoded tRNA glycine 12 (anticodon GCC)
n-TEctc8 1 171071792 to 171071863 71 - tRNA gene nuclear encoded tRNA glutamic acid 8 (anticodon CTC)
Gm27552 1 171072226 to 171072287 61 - miRNA gene predicted gene, 27552
n-TGtcc5 1 171072334 to 171072405 71 - tRNA gene nuclear encoded tRNA glycine 5 (anticodon TCC)
n-TDgtc7 1 171072993 to 171073064 71 - tRNA gene nuclear encoded tRNA aspartic acid 7 (anticodon GTC)
n-TLcag7 1 171073619 to 171073701 82 + tRNA gene nuclear encoded tRNA leucine 7 (anticodon CAG)
n-TGgcc13 1 171074302 to 171074372 70 + tRNA gene nuclear encoded tRNA glycine 13 (anticodon GCC)
Cpgi1006 1 171078614 to 171078784 170 CpG island CpG island 1006
n-TEctc7 1 171079406 to 171079477 71 - tRNA gene nuclear encoded tRNA glutamic acid 7 (anticodon CTC)
Gm27844 1 171079840 to 171079901 61 - miRNA gene predicted gene, 27844
n-TGtcc4 1 171079948 to 171080019 71 - tRNA gene nuclear encoded tRNA glycine 4 (anticodon TCC)
n-TDgtc6 1 171080607 to 171080678 71 - tRNA gene nuclear encoded tRNA aspartic acid 6 (anticodon GTC)
n-TLcag8 1 171081233 to 171081315 82 + tRNA gene nuclear encoded tRNA leucine 8 (anticodon CAG)
n-TGgcc14 1 171081876 to 171081946 70 + tRNA gene nuclear encoded tRNA glycine 14 (anticodon GCC)
Cpgi1007 1 171085741 to 171086115 374 CpG island CpG island 1007
Tssr14978 1 171089980 to 171089989 9 - TSS region transcription start site region 14978