Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:171024985-171065055

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(1Fcgr2b-Fcgr3)1Rav 1 170960558 to 171064935 104377 chromosomal deletion deletion, Chr 1, Jeffrey V Ravetch 1
Del(1Fcgr2b-Fcgr3)1Vlcg 1 170960558 to 171064935 104377 chromosomal deletion deletion, Chr1, Regeneron Pharmaceuticals
Fcgr4 1 171018926 to 171029761 10835 + protein coding gene Fc receptor, IgG, low affinity IV
Tssr9950 1 171025579 to 171025593 14 + TSS region transcription start site region 9950
Tssr9951 1 171027961 to 171027972 11 + TSS region transcription start site region 9951
Gm26110 1 171027965 to 171028129 164 + snRNA gene predicted gene, 26110
Tssr9952 1 171029237 to 171029255 18 + TSS region transcription start site region 9952
Tssr9953 1 171029303 to 171029315 12 + TSS region transcription start site region 9953
Tssr9954 1 171029343 to 171029356 13 + TSS region transcription start site region 9954
Tssr9955 1 171029366 to 171029385 19 + TSS region transcription start site region 9955
Tssr9956 1 171029388 to 171029403 15 + TSS region transcription start site region 9956
Tssr9957 1 171029412 to 171029425 13 + TSS region transcription start site region 9957
Tssr9958 1 171029431 to 171029438 7 + TSS region transcription start site region 9958
Tssr9959 1 171032854 to 171032858 4 + TSS region transcription start site region 9959
Cpgi1001 1 171033139 to 171033330 191 CpG island CpG island 1001
Gm35090 1 171033230 to 171034018 788 - lncRNA gene predicted gene, 35090
Cpgi1002 1 171033522 to 171034074 552 CpG island CpG island 1002
n-TNgtt6 1 171033942 to 171034015 73 - tRNA gene nuclear encoded tRNA asparagine 6 (anticodon GTT)
n-TDgtc4 1 171037029 to 171037100 71 - tRNA gene nuclear encoded tRNA aspartic acid 4 (anticodon GTC)
n-TGtcc2 1 171037997 to 171038068 71 - tRNA gene nuclear encoded tRNA glycine 2 (anticodon TCC)
Cpgi1003 1 171038060 to 171038560 500 CpG island CpG island 1003
n-TLcag3 1 171038614 to 171038696 82 + tRNA gene nuclear encoded tRNA leucine 3 (anticodon CAG)
Alcw1 1 171040785 to 172138790 1098005 QTL alcohol withdrawal 1
Cpgi1004 1 171044596 to 171044828 232 CpG island CpG island 1004
n-TGgcc4 1 171044985 to 171045055 70 + tRNA gene nuclear encoded tRNA glycine 4 (anticodon GCC)
Qrr1 1 171051174 to 175492500 4441326 QTL QTL rich region on chromosome 1
Szs1 1 171051174 to 174628870 3577696 QTL seizure susceptibility 1
Fcgr3 1 171051174 to 171064935 13761 - protein coding gene Fc receptor, IgG, low affinity III
Tssr9960 1 171051188 to 171051201 13 + TSS region transcription start site region 9960
Tssr9961 1 171051246 to 171051267 21 + TSS region transcription start site region 9961
Tssr14968 1 171051821 to 171051864 43 - TSS region transcription start site region 14968
Tssr14969 1 171053979 to 171054011 32 - TSS region transcription start site region 14969
Tssr14970 1 171057971 to 171057981 10 - TSS region transcription start site region 14970
Tssr14971 1 171058038 to 171058060 22 - TSS region transcription start site region 14971
Tssr14972 1 171058078 to 171058079 1 - TSS region transcription start site region 14972
Tssr14973 1 171058374 to 171058383 9 - TSS region transcription start site region 14973
Tssr14974 1 171058605 to 171058637 32 - TSS region transcription start site region 14974
Tssr14975 1 171059348 to 171059379 31 - TSS region transcription start site region 14975
Tssr14976 1 171059390 to 171059405 15 - TSS region transcription start site region 14976
Tssr14977 1 171059589 to 171059595 6 - TSS region transcription start site region 14977
Cpgi1005 1 171063753 to 171064053 300 CpG island CpG island 1005
n-TEctc5 1 171064164 to 171064235 71 - tRNA gene nuclear encoded tRNA glutamic acid 5 (anticodon CTC)
Mir6546 1 171064591 to 171064652 61 - miRNA gene microRNA 6546
n-TGtcc1 1 171064699 to 171064770 71 - tRNA gene nuclear encoded tRNA glycine 1 (anticodon TCC)