Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:165831617-166053505

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cd247 1 165788681 to 165877277 88596 + protein coding gene CD247 antigen
Tssr14797 1 165836481 to 165836505 24 - TSS region transcription start site region 14797
Tssr9850 1 165838672 to 165838676 4 + TSS region transcription start site region 9850
Tssr268 1 165838923 to 165838928 5 + TSS region transcription start site region 268
Tssr269 1 165839886 to 165839898 12 - TSS region transcription start site region 269
Cpgi956 1 165840879 to 165841197 318 CpG island CpG island 956
Tssr9851 1 165841056 to 165841067 11 + TSS region transcription start site region 9851
Tssr9852 1 165841669 to 165841682 13 + TSS region transcription start site region 9852
Gm32999 1 165844047 to 165844608 561 - lncRNA gene predicted gene, 32999
Cpgi957 1 165844856 to 165845572 716 CpG island CpG island 957
Gm37856 1 165845087 to 165846085 998 - unclassified gene predicted gene, 37856
Gm37469 1 165848155 to 165849044 889 - antisense lncRNA gene predicted gene, 37469
Tssr14798 1 165848955 to 165848987 32 - TSS region transcription start site region 14798
Tssr14799 1 165849039 to 165849050 11 - TSS region transcription start site region 14799
Tssr14800 1 165849053 to 165849073 20 - TSS region transcription start site region 14800
Tssr9853 1 165851588 to 165851591 3 + TSS region transcription start site region 9853
Tssr9854 1 165856158 to 165856206 48 + TSS region transcription start site region 9854
Tssr9855 1 165864629 to 165864634 5 + TSS region transcription start site region 9855
Tssr9856 1 165864642 to 165864660 18 + TSS region transcription start site region 9856
Pou2f1 1 165865150 to 166002672 137522 - protein coding gene POU domain, class 2, transcription factor 1
A430104F18Rik 1 165872052 to 165875279 3227 unclassified non-coding RNA gene RIKEN cDNA A430104F18 gene
A830054O07Rik 1 165883440 to 165887183 3743 unclassified gene RIKEN cDNA A830054O07 gene
Tssr14801 1 165935018 to 165935036 18 - TSS region transcription start site region 14801
Gm17976 1 165941617 to 165943505 1888 + pseudogene predicted gene, 17976
Tssr14802 1 165948535 to 165948537 2 - TSS region transcription start site region 14802
A630006J10Rik 1 165997253 to 166001285 4032 unclassified gene RIKEN cDNA A630006J10 gene
Cpgi958 1 166001367 to 166003733 2366 CpG island CpG island 958
Tssr14803 1 166002591 to 166002609 18 - TSS region transcription start site region 14803
Tssr14804 1 166002613 to 166002647 34 - TSS region transcription start site region 14804
Gm26665 1 166002960 to 166038256 35296 + lincRNA gene predicted gene, 26665
Tssr270 1 166003344 to 166003391 47 - TSS region transcription start site region 270
Gm7626 1 166043339 to 166043691 352 - pseudogene predicted gene 7626
Cpgi959 1 166043421 to 166043731 310 CpG island CpG island 959
Gm33224 1 166045452 to 166049086 3634 - lncRNA gene predicted gene, 33224
Tssr14805 1 166047823 to 166047834 11 - TSS region transcription start site region 14805
Tssr14806 1 166047841 to 166047850 9 - TSS region transcription start site region 14806
Cpgi960 1 166047863 to 166048295 432 CpG island CpG island 960
Gm39693 1 166049283 to 166050951 1668 + lncRNA gene predicted gene, 39693
Tssr14807 1 166049289 to 166049299 10 - TSS region transcription start site region 14807