Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:163947129-164177170

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scyl3 1 163929100 to 163955126 26026 + protein coding gene SCY1-like 3 (S. cerevisiae)
BC055324 1 163945993 to 163994796 48803 - protein coding gene cDNA sequence BC055324
Cpgi941 1 163994265 to 163995222 957 CpG island CpG island 941
Tssr14719 1 163994737 to 163994765 28 - TSS region transcription start site region 14719
Tssr14720 1 163994767 to 163994808 41 - TSS region transcription start site region 14720
Tssr9741 1 163994866 to 163994904 38 + TSS region transcription start site region 9741
Mettl18 1 163994891 to 163997243 2352 + protein coding gene methyltransferase like 18
Tssr9742 1 163994924 to 163994935 11 + TSS region transcription start site region 9742
Tssr14721 1 164020988 to 164021012 24 - TSS region transcription start site region 14721
Gm37119 1 164031960 to 164032348 388 + pseudogene predicted gene, 37119
Tssr265 1 164039831 to 164039838 7 + TSS region transcription start site region 265
Tssr9743 1 164048214 to 164048216 2 + TSS region transcription start site region 9743
Sele 1 164048234 to 164057677 9443 + protein coding gene selectin, endothelial cell
Sell 1 164061813 to 164080785 18972 + protein coding gene selectin, lymphocyte
Tssr9744 1 164062047 to 164062058 11 + TSS region transcription start site region 9744
Tssr9745 1 164062070 to 164062098 28 + TSS region transcription start site region 9745
Tssr9746 1 164062112 to 164062124 12 + TSS region transcription start site region 9746
Tssr9747 1 164062129 to 164062170 41 + TSS region transcription start site region 9747
Tssr14722 1 164062997 to 164063008 11 - TSS region transcription start site region 14722
Tssr9748 1 164063102 to 164063109 7 + TSS region transcription start site region 9748
Tssr9749 1 164063287 to 164063304 17 + TSS region transcription start site region 9749
Tssr14723 1 164086911 to 164086922 11 - TSS region transcription start site region 14723
Tssr14724 1 164098043 to 164098074 31 - TSS region transcription start site region 14724
Selp 1 164115264 to 164150026 34762 + protein coding gene selectin, platelet
Tssr9750 1 164115290 to 164115300 10 + TSS region transcription start site region 9750
Tssr9751 1 164115302 to 164115313 11 + TSS region transcription start site region 9751
Tssr9752 1 164115319 to 164115330 11 + TSS region transcription start site region 9752
Tssr9753 1 164115331 to 164115347 16 + TSS region transcription start site region 9753
Tssr9754 1 164115350 to 164115369 19 + TSS region transcription start site region 9754
Tssr9755 1 164135668 to 164135678 10 + TSS region transcription start site region 9755
Tssr9756 1 164136202 to 164136235 33 + TSS region transcription start site region 9756
Tssr266 1 164136241 to 164136250 9 + TSS region transcription start site region 266
Gm16587 1 164143432 to 164146366 2934 - antisense lncRNA gene predicted gene 16587
Gm16548 1 164148591 to 164152217 3626 - lincRNA gene predicted gene 16548
Tssr9757 1 164151566 to 164151591 25 + TSS region transcription start site region 9757
Tssr9758 1 164151719 to 164151732 13 + TSS region transcription start site region 9758
Tssr9759 1 164151803 to 164151814 11 + TSS region transcription start site region 9759
Tssr9760 1 164151815 to 164151862 47 + TSS region transcription start site region 9760
F5 1 164151838 to 164220277 68439 + protein coding gene coagulation factor V
Tssr9761 1 164151871 to 164151882 11 + TSS region transcription start site region 9761
Tssr9762 1 164151888 to 164151897 9 + TSS region transcription start site region 9762
Tssr9763 1 164152023 to 164152044 21 + TSS region transcription start site region 9763
Tssr14725 1 164152936 to 164152962 26 - TSS region transcription start site region 14725
Gm16588 1 164166579 to 164166933 354 + pseudogene predicted gene 16588