Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:163223709-163403712

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prrx1 1 163245119 to 163313705 68586 - protein coding gene paired related homeobox 1
Gm20471 1 163280356 to 163287045 6689 + antisense lncRNA gene predicted gene 20471
Tssr14695 1 163289214 to 163289235 21 - TSS region transcription start site region 14695
Tssr14696 1 163289322 to 163289338 16 - TSS region transcription start site region 14696
Gm26523 1 163301790 to 163303620 1830 - lincRNA gene predicted gene, 26523
Tssr14697 1 163304517 to 163304520 3 - TSS region transcription start site region 14697
D1Mit506 1 163306348 to 163306466 118 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 506
Gm37644 1 163306798 to 163309067 2269 - unclassified gene predicted gene, 37644
Cpgi935 1 163308746 to 163308926 180 CpG island CpG island 935
Cpgi936 1 163311774 to 163312713 939 CpG island CpG island 936
Tssr14698 1 163312420 to 163312423 3 - TSS region transcription start site region 14698
Tssr14699 1 163312521 to 163312543 22 - TSS region transcription start site region 14699
Tssr14700 1 163312570 to 163312585 15 - TSS region transcription start site region 14700
Tssr14701 1 163312595 to 163312645 50 - TSS region transcription start site region 14701
Tssr14702 1 163312707 to 163312732 25 - TSS region transcription start site region 14702
Tssr14703 1 163312949 to 163312953 4 - TSS region transcription start site region 14703
Tssr14704 1 163313005 to 163313006 1 - TSS region transcription start site region 14704
Tssr262 1 163313018 to 163313023 5 - TSS region transcription start site region 262
Tssr14705 1 163313066 to 163313076 10 - TSS region transcription start site region 14705
Tssr14706 1 163313141 to 163313152 11 - TSS region transcription start site region 14706
Tssr14707 1 163313248 to 163313271 23 - TSS region transcription start site region 14707
Tssr14708 1 163313460 to 163313494 34 - TSS region transcription start site region 14708
Tssr14709 1 163313507 to 163313518 11 - TSS region transcription start site region 14709
Tssr14710 1 163313522 to 163313533 11 - TSS region transcription start site region 14710
Tssr14711 1 163313661 to 163313677 16 - TSS region transcription start site region 14711
Tssr14712 1 163313693 to 163313696 3 - TSS region transcription start site region 14712
Tssr263 1 163313709 to 163313712 3 - TSS region transcription start site region 263
Tssr14713 1 163313847 to 163313861 14 - TSS region transcription start site region 14713
Tssr14714 1 163314113 to 163314123 10 - TSS region transcription start site region 14714
Tssr14715 1 163314438 to 163314464 26 - TSS region transcription start site region 14715
Cpgi937 1 163314999 to 163315266 267 CpG island CpG island 937
Tssr9725 1 163358382 to 163358387 5 + TSS region transcription start site region 9725
Gorab 1 163384908 to 163403669 18761 - protein coding gene golgin, RAB6-interacting
Gm24940 1 163402283 to 163402390 107 + snRNA gene predicted gene, 24940
Cpgi938 1 163403462 to 163404008 546 CpG island CpG island 938
Tssr14716 1 163403604 to 163403619 15 - TSS region transcription start site region 14716
Tssr14717 1 163403627 to 163403679 52 - TSS region transcription start site region 14717