Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:162743014-163306682

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fmo4 1 162793188 to 162813972 20784 - protein coding gene flavin containing monooxygenase 4
D1Ertd532e 1 162812817 to 162813066 249 DNA segment DNA segment, Chr 1, ERATO Doi 532, expressed
Tssr14658 1 162813243 to 162813291 48 - TSS region transcription start site region 14658
Tssr14659 1 162813873 to 162813883 10 - TSS region transcription start site region 14659
Tssr14660 1 162813942 to 162813953 11 - TSS region transcription start site region 14660
Fmo1 1 162829561 to 162866548 36987 - protein coding gene flavin containing monooxygenase 1
Tssr14661 1 162834303 to 162834307 4 - TSS region transcription start site region 14661
Tssr9723 1 162857242 to 162857248 6 + TSS region transcription start site region 9723
Tssr14662 1 162859556 to 162859572 16 - TSS region transcription start site region 14662
Tssr14663 1 162859684 to 162859735 51 - TSS region transcription start site region 14663
Tssr14664 1 162859811 to 162859825 14 - TSS region transcription start site region 14664
Tssr14665 1 162859831 to 162859842 11 - TSS region transcription start site region 14665
Tssr14666 1 162859872 to 162859883 11 - TSS region transcription start site region 14666
Tssr14667 1 162859919 to 162859973 54 - TSS region transcription start site region 14667
Tssr14668 1 162859984 to 162859994 10 - TSS region transcription start site region 14668
Tssr14669 1 162860060 to 162860077 17 - TSS region transcription start site region 14669
Tssr14670 1 162860079 to 162860094 15 - TSS region transcription start site region 14670
Tssr14671 1 162860097 to 162860108 11 - TSS region transcription start site region 14671
Tssr14672 1 162860114 to 162860126 12 - TSS region transcription start site region 14672
Tssr14673 1 162866359 to 162866402 43 - TSS region transcription start site region 14673
Tssr14674 1 162866425 to 162866432 7 - TSS region transcription start site region 14674
Tssr14675 1 162866440 to 162866451 11 - TSS region transcription start site region 14675
Tssr14676 1 162866463 to 162866468 5 - TSS region transcription start site region 14676
Tssr14677 1 162866483 to 162866501 18 - TSS region transcription start site region 14677
Tssr14678 1 162866502 to 162866616 114 - TSS region transcription start site region 14678
Gm32197 1 162872700 to 162873622 922 + lncRNA gene predicted gene, 32197
Fmo2 1 162874321 to 162898712 24391 - protein coding gene flavin containing monooxygenase 2
Tssr14679 1 162875383 to 162875393 10 - TSS region transcription start site region 14679
Tssr14680 1 162881561 to 162881565 4 - TSS region transcription start site region 14680
Tssr14681 1 162886469 to 162886491 22 - TSS region transcription start site region 14681
Tssr14682 1 162886499 to 162886502 3 - TSS region transcription start site region 14682
Tssr14683 1 162886512 to 162886537 25 - TSS region transcription start site region 14683
Tssr14684 1 162898317 to 162898328 11 - TSS region transcription start site region 14684
Tssr14685 1 162898330 to 162898342 12 - TSS region transcription start site region 14685
Tssr14686 1 162898349 to 162898368 19 - TSS region transcription start site region 14686
Tssr14687 1 162898376 to 162898393 17 - TSS region transcription start site region 14687
Tssr14688 1 162898395 to 162898456 61 - TSS region transcription start site region 14688
Tssr14689 1 162898485 to 162898498 13 - TSS region transcription start site region 14689
Tssr14690 1 162898711 to 162898728 17 - TSS region transcription start site region 14690
Tssr14691 1 162898755 to 162898760 5 - TSS region transcription start site region 14691
Fmo6 1 162916551 to 162937515 20964 - protein coding gene flavin containing monooxygenase 6
Gm32279 1 162933618 to 162937060 3442 + lncRNA gene predicted gene, 32279
Tssr14692 1 162937525 to 162937555 30 - TSS region transcription start site region 14692
Fmo3 1 162953800 to 162984528 30728 - protein coding gene flavin containing monooxygenase 3
Gm37273 1 162983014 to 163066682 83668 + antisense lncRNA gene predicted gene, 37273
Tssr9724 1 162983054 to 162983056 2 + TSS region transcription start site region 9724
Tssr14693 1 162984519 to 162984533 14 - TSS region transcription start site region 14693
Gm18450 1 163022598 to 163023426 828 + pseudogene predicted gene, 18450
Mroh9 1 163024302 to 163085670 61368 - protein coding gene maestro heat-like repeat family member 9
Gm22671 1 163054818 to 163054951 133 - snoRNA gene predicted gene, 22671
Tssr14694 1 163085643 to 163085674 31 - TSS region transcription start site region 14694
Gm37049 1 163108993 to 163110975 1982 + unclassified gene predicted gene, 37049
Gm22434 1 163118227 to 163118348 121 + snoRNA gene predicted gene, 22434
D1Mit314 1 163125921 to 163126036 115 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 314
Emo1 1 163149528 to 186261999 23112471 QTL emotionality 1
D1Mit452 1 163149528 to 163149625 97 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 452
Prrx1 1 163245119 to 163313705 68586 - protein coding gene paired related homeobox 1
Gm20471 1 163280356 to 163287045 6689 + antisense lncRNA gene predicted gene 20471
Tssr14695 1 163289214 to 163289235 21 - TSS region transcription start site region 14695
Tssr14696 1 163289322 to 163289338 16 - TSS region transcription start site region 14696
Gm26523 1 163301790 to 163303620 1830 - lincRNA gene predicted gene, 26523
Tssr14697 1 163304517 to 163304520 3 - TSS region transcription start site region 14697
D1Mit506 1 163306348 to 163306466 118 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 506