Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:155522544-156423804

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142 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5532 1 155520173 to 155527111 6938 - lincRNA gene predicted gene 5532
Tssr14363 1 155527083 to 155527091 8 - TSS region transcription start site region 14363
Tssr14364 1 155527133 to 155527155 22 - TSS region transcription start site region 14364
Tssr14365 1 155527156 to 155527165 9 - TSS region transcription start site region 14365
Tssr14366 1 155527172 to 155527186 14 - TSS region transcription start site region 14366
Cpgi886 1 155557794 to 155558832 1038 CpG island CpG island 886
Acbd6 1 155558098 to 155687474 129376 + protein coding gene acyl-Coenzyme A binding domain containing 6
Tssr9537 1 155558112 to 155558232 120 + TSS region transcription start site region 9537
Tssr9538 1 155558319 to 155558402 83 + TSS region transcription start site region 9538
Tssr9539 1 155558411 to 155558421 10 + TSS region transcription start site region 9539
Tssr9540 1 155558497 to 155558552 55 + TSS region transcription start site region 9540
Lhx4 1 155698031 to 155751684 53653 - protein coding gene LIM homeobox protein 4
D1Mit34 1 155706491 to 155706677 186 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 34
Shali5 1 155706491 to 186261999 30555508 QTL survival time to hyperoxic acute lung injury 5
D1Dcr5 1 155713164 to 155713291 127 DNA segment DNA segment, Chr 1, Derry C. Roopenian 5
Cpgi887 1 155736290 to 155738274 1984 CpG island CpG island 887
Cpgi888 1 155740518 to 155743383 2865 CpG island CpG island 888
Tssr14367 1 155742001 to 155742046 45 - TSS region transcription start site region 14367
Tssr14368 1 155742125 to 155742136 11 - TSS region transcription start site region 14368
Tssr9541 1 155742509 to 155742515 6 + TSS region transcription start site region 9541
Tssr14369 1 155751719 to 155751738 19 - TSS region transcription start site region 14369
Gm37089 1 155766146 to 155766274 128 + pseudogene predicted gene, 37089
Qsox1 1 155778155 to 155812899 34744 - protein coding gene quiescin Q6 sulfhydryl oxidase 1
Tssr14370 1 155779096 to 155779101 5 - TSS region transcription start site region 14370
Gm37539 1 155789124 to 155789358 234 + unclassified gene predicted gene, 37539
Cpgi889 1 155812232 to 155813468 1236 CpG island CpG island 889
Tssr14371 1 155812805 to 155812857 52 - TSS region transcription start site region 14371
Tssr14372 1 155812859 to 155812883 24 - TSS region transcription start site region 14372
Tssr14373 1 155812890 to 155812906 16 - TSS region transcription start site region 14373
Tssr14374 1 155813043 to 155813056 13 - TSS region transcription start site region 14374
Gm37571 1 155818494 to 155859591 41097 + antisense lncRNA gene predicted gene, 37571
Cep350 1 155844964 to 155973255 128291 - protein coding gene centrosomal protein 350
Gm38038 1 155855449 to 155855707 258 + pseudogene predicted gene, 38038
Tssr14375 1 155861414 to 155861429 15 - TSS region transcription start site region 14375
Gm36934 1 155864960 to 155865265 305 + pseudogene predicted gene, 36934
Gm37383 1 155881802 to 155882546 744 - unclassified gene predicted gene, 37383
Tssr14376 1 155947714 to 155947719 5 - TSS region transcription start site region 14376
Gm23744 1 155954574 to 155954722 148 + snRNA gene predicted gene, 23744
Tlln 1 155962068 to 159562802 3600734 QTL tail length
Bmd1a 1 155962068 to 162317756 6355688 QTL bone mineral density 1a
D1Mit451 1 155962068 to 155962217 149 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 451
Tssr9542 1 155972500 to 155972549 49 + TSS region transcription start site region 9542
Cpgi890 1 155972544 to 155973804 1260 CpG island CpG island 890
Tssr14377 1 155973173 to 155973204 31 - TSS region transcription start site region 14377
Tssr14378 1 155973205 to 155973259 54 - TSS region transcription start site region 14378
Gm9694 1 155973318 to 155974506 1188 + unclassified gene predicted gene 9694
Tssr14379 1 155973355 to 155973372 17 - TSS region transcription start site region 14379
Tssr14380 1 156000411 to 156000415 4 - TSS region transcription start site region 14380
Tor1aip1 1 156004599 to 156036480 31881 - protein coding gene torsin A interacting protein 1
Tssr9543 1 156005394 to 156005420 26 + TSS region transcription start site region 9543
Tssr14381 1 156005690 to 156005709 19 - TSS region transcription start site region 14381
Tssr14382 1 156005739 to 156005785 46 - TSS region transcription start site region 14382
Tssr14383 1 156005790 to 156005810 20 - TSS region transcription start site region 14383
Tssr14384 1 156005832 to 156005857 25 - TSS region transcription start site region 14384
Tssr14385 1 156005874 to 156005888 14 - TSS region transcription start site region 14385
Tssr14386 1 156005889 to 156005907 18 - TSS region transcription start site region 14386
Tssr14387 1 156006212 to 156006231 19 - TSS region transcription start site region 14387
Tssr14388 1 156007708 to 156007722 14 - TSS region transcription start site region 14388
9430034N14Rik 1 156026223 to 156030007 3784 - unclassified gene RIKEN cDNA 9430034N14 gene
Tssr14389 1 156029769 to 156029793 24 - TSS region transcription start site region 14389
Tssr14390 1 156032948 to 156032978 30 - TSS region transcription start site region 14390
Tssr14391 1 156033788 to 156033804 16 - TSS region transcription start site region 14391
Tssr14392 1 156034765 to 156034779 14 - TSS region transcription start site region 14392
Tssr14393 1 156034790 to 156034797 7 - TSS region transcription start site region 14393
Tssr14394 1 156034800 to 156034814 14 - TSS region transcription start site region 14394
Tssr14395 1 156034824 to 156034825 1 - TSS region transcription start site region 14395
Tssr14396 1 156034826 to 156034839 13 - TSS region transcription start site region 14396
Tssr14397 1 156034857 to 156034864 7 - TSS region transcription start site region 14397
Tssr14398 1 156035336 to 156035340 4 - TSS region transcription start site region 14398
Cpgi891 1 156035386 to 156036679 1293 CpG island CpG island 891
Tssr9544 1 156035392 to 156035431 39 + TSS region transcription start site region 9544
Tor1aip2 1 156035664 to 156068861 33197 + protein coding gene torsin A interacting protein 2
Tssr9545 1 156035705 to 156035763 58 + TSS region transcription start site region 9545
Tssr9546 1 156035775 to 156035788 13 + TSS region transcription start site region 9546
Tssr14399 1 156035786 to 156035801 15 - TSS region transcription start site region 14399
Tssr14400 1 156035881 to 156035890 9 - TSS region transcription start site region 14400
Tssr14401 1 156035891 to 156035936 45 - TSS region transcription start site region 14401
Tssr14402 1 156035954 to 156035966 12 - TSS region transcription start site region 14402
Tssr14403 1 156035967 to 156035980 13 - TSS region transcription start site region 14403
Tssr14404 1 156036011 to 156036015 4 - TSS region transcription start site region 14404
Tssr14405 1 156036025 to 156036074 49 - TSS region transcription start site region 14405
Tssr14406 1 156036087 to 156036098 11 - TSS region transcription start site region 14406
Tssr14407 1 156036116 to 156036139 23 - TSS region transcription start site region 14407
Tssr14408 1 156036149 to 156036157 8 - TSS region transcription start site region 14408
Tssr9547 1 156036188 to 156036258 70 + TSS region transcription start site region 9547
Tssr14409 1 156036383 to 156036400 17 - TSS region transcription start site region 14409
Tssr14410 1 156036417 to 156036454 37 - TSS region transcription start site region 14410
Tssr250 1 156036463 to 156036468 5 - TSS region transcription start site region 250
Tssr14411 1 156036473 to 156036478 5 - TSS region transcription start site region 14411
Tssr14412 1 156037347 to 156037353 6 - TSS region transcription start site region 14412
Tssr14413 1 156037395 to 156037414 19 - TSS region transcription start site region 14413
Tssr14414 1 156037433 to 156037454 21 - TSS region transcription start site region 14414
Cpgi892 1 156040783 to 156041041 258 CpG island CpG island 892
Tssr9548 1 156040884 to 156040898 14 + TSS region transcription start site region 9548
Tssr9549 1 156040909 to 156040925 16 + TSS region transcription start site region 9549
Tssr9550 1 156041080 to 156041108 28 + TSS region transcription start site region 9550
Tssr9551 1 156044251 to 156044252 1 + TSS region transcription start site region 9551
Tssr9552 1 156051386 to 156051393 7 + TSS region transcription start site region 9552
Tssr9553 1 156051433 to 156051454 21 + TSS region transcription start site region 9553
Tssr9554 1 156052299 to 156052313 14 + TSS region transcription start site region 9554
Tssr9555 1 156052448 to 156052474 26 + TSS region transcription start site region 9555
Tssr9556 1 156067468 to 156067473 5 + TSS region transcription start site region 9556
Tssr9557 1 156067831 to 156067834 3 + TSS region transcription start site region 9557
Fam163a 1 156075966 to 156205026 129060 - protein coding gene family with sequence similarity 163, member A
D1Mit267 1 156090917 to 156091033 116 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 267
Cpgi893 1 156204318 to 156205287 969 CpG island CpG island 893
Tssr14415 1 156204998 to 156205032 34 - TSS region transcription start site region 14415
Gm30472 1 156213111 to 156280187 67076 + lncRNA gene predicted gene, 30472
Tssr9558 1 156213134 to 156213164 30 + TSS region transcription start site region 9558
Gm38113 1 156227093 to 156227293 200 - pseudogene predicted gene, 38113
Tdrd5 1 156255296 to 156303664 48368 - protein coding gene tudor domain containing 5
Tssr14416 1 156270665 to 156270676 11 - TSS region transcription start site region 14416
Tssr14417 1 156270688 to 156270699 11 - TSS region transcription start site region 14417
Tssr14418 1 156270737 to 156270746 9 - TSS region transcription start site region 14418
Tssr14419 1 156270764 to 156270767 3 - TSS region transcription start site region 14419
Tssr14420 1 156270775 to 156270791 16 - TSS region transcription start site region 14420
Tssr14421 1 156270822 to 156270829 7 - TSS region transcription start site region 14421
Tssr14422 1 156280363 to 156280397 34 - TSS region transcription start site region 14422
A430050A11Rik 1 156290102 to 156290747 645 - unclassified gene RIKEN cDNA A430050A11 gene
Cpgi894 1 156302787 to 156303831 1044 CpG island CpG island 894
Tssr14423 1 156303362 to 156303388 26 - TSS region transcription start site region 14423
Tssr14424 1 156303390 to 156303438 48 - TSS region transcription start site region 14424
Tssr9559 1 156303465 to 156303470 5 + TSS region transcription start site region 9559
Tssr9560 1 156303473 to 156303501 28 + TSS region transcription start site region 9560
4930518J20Rik 1 156303489 to 156304966 1477 + antisense lncRNA gene RIKEN cDNA 4930518J20 gene
Tssr9561 1 156303503 to 156303510 7 + TSS region transcription start site region 9561
Tssr14425 1 156303572 to 156303577 5 - TSS region transcription start site region 14425
Tssr14426 1 156303585 to 156303616 31 - TSS region transcription start site region 14426
Tssr9562 1 156310716 to 156310734 18 + TSS region transcription start site region 9562
Cpgi895 1 156310717 to 156311227 510 CpG island CpG island 895
Nphs2 1 156310727 to 156328035 17308 + protein coding gene nephrosis 2, podocin
Axdnd1 1 156330415 to 156420915 90500 - protein coding gene axonemal dynein light chain domain containing 1
Tssr14427 1 156340951 to 156340961 10 - TSS region transcription start site region 14427
Tssr9563 1 156366037 to 156366044 7 + TSS region transcription start site region 9563
Gm2000 1 156366040 to 156366484 444 + protein coding gene predicted gene 2000
D1Mit313 1 156389619 to 156389752 133 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 313
Tssr9564 1 156406984 to 156406996 12 + TSS region transcription start site region 9564
Cpgi896 1 156420606 to 156421162 556 CpG island CpG island 896
Tssr14428 1 156420872 to 156420897 25 - TSS region transcription start site region 14428
Tssr14429 1 156420899 to 156420914 15 - TSS region transcription start site region 14429
Tssr14430 1 156421109 to 156421119 10 - TSS region transcription start site region 14430
Tssr14431 1 156421146 to 156421157 11 - TSS region transcription start site region 14431