Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:155060434-155500438

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41980 1 155021248 to 155061614 40366 - lncRNA gene predicted gene, 41980
Tssr9523 1 155062301 to 155062319 18 + TSS region transcription start site region 9523
Gm9530 1 155063447 to 155083266 19819 - lincRNA gene predicted gene 9530
Cpgi881 1 155082947 to 155084061 1114 CpG island CpG island 881
Tssr9524 1 155083707 to 155083733 26 + TSS region transcription start site region 9524
Tssr14334 1 155084152 to 155084161 9 - TSS region transcription start site region 14334
Ier5 1 155096367 to 155099636 3269 - protein coding gene immediate early response 5
Tssr249 1 155096727 to 155096748 21 - TSS region transcription start site region 249
Cpgi882 1 155097984 to 155099856 1872 CpG island CpG island 882
Tssr14335 1 155097986 to 155098002 16 - TSS region transcription start site region 14335
Tssr9525 1 155098193 to 155098231 38 + TSS region transcription start site region 9525
Tssr9526 1 155098233 to 155098259 26 + TSS region transcription start site region 9526
Tssr9527 1 155098284 to 155098296 12 + TSS region transcription start site region 9527
Tssr14336 1 155098732 to 155098746 14 - TSS region transcription start site region 14336
Tssr14337 1 155099470 to 155099481 11 - TSS region transcription start site region 14337
Tssr14338 1 155099533 to 155099544 11 - TSS region transcription start site region 14338
Tssr14339 1 155099630 to 155099633 3 - TSS region transcription start site region 14339
Tssr9528 1 155104966 to 155104968 2 + TSS region transcription start site region 9528
Gm41981 1 155112307 to 155119199 6892 - lncRNA gene predicted gene, 41981
Tssr9529 1 155117068 to 155117071 3 + TSS region transcription start site region 9529
Gm30922 1 155122382 to 155130614 8232 + lncRNA gene predicted gene, 30922
Tssr9530 1 155122418 to 155122425 7 + TSS region transcription start site region 9530
Mr1 1 155127872 to 155146813 18941 - protein coding gene major histocompatibility complex, class I-related
Tssr14340 1 155128502 to 155128533 31 - TSS region transcription start site region 14340
Tssr9531 1 155145850 to 155145855 5 + TSS region transcription start site region 9531
Tssr14341 1 155146755 to 155146789 34 - TSS region transcription start site region 14341
Tssr14342 1 155146791 to 155146820 29 - TSS region transcription start site region 14342
Cpgi883 1 155158473 to 155159419 946 CpG island CpG island 883
Stx6 1 155158677 to 155207567 48890 + protein coding gene syntaxin 6
Tssr9532 1 155158684 to 155158701 17 + TSS region transcription start site region 9532
Tssr9533 1 155158704 to 155158776 72 + TSS region transcription start site region 9533
Tssr14343 1 155159293 to 155159339 46 - TSS region transcription start site region 14343
Tssr9534 1 155161538 to 155161544 6 + TSS region transcription start site region 9534
D1Mit55 1 155166854 to 155167004 150 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 55
Gm8850 1 155179801 to 155180388 587 + pseudogene predicted gene 8850
Gm46166 1 155206993 to 155212060 5067 - lncRNA gene predicted gene, 46166
BC034090 1 155212471 to 155244444 31973 - protein coding gene cDNA sequence BC034090
Tssr14344 1 155230129 to 155230143 14 - TSS region transcription start site region 14344
Tssr14345 1 155230191 to 155230200 9 - TSS region transcription start site region 14345
Gm37622 1 155231304 to 155233159 1855 + antisense lncRNA gene predicted gene, 37622
Tssr14346 1 155232576 to 155232589 13 - TSS region transcription start site region 14346
Tssr14347 1 155232590 to 155232595 5 - TSS region transcription start site region 14347
Tssr14348 1 155232597 to 155232606 9 - TSS region transcription start site region 14348
Tssr14349 1 155232609 to 155232637 28 - TSS region transcription start site region 14349
Tssr14350 1 155232676 to 155232704 28 - TSS region transcription start site region 14350
Tssr14351 1 155232710 to 155232729 19 - TSS region transcription start site region 14351
Gm31102 1 155243076 to 155256851 13775 + lncRNA gene predicted gene, 31102
Cpgi884 1 155243981 to 155245144 1163 CpG island CpG island 884
Tssr14352 1 155244460 to 155244497 37 - TSS region transcription start site region 14352
Tssr14353 1 155244499 to 155244544 45 - TSS region transcription start site region 14353
Tssr9535 1 155244611 to 155244622 11 + TSS region transcription start site region 9535
Xpr1 1 155275701 to 155417415 141714 - protein coding gene xenotropic and polytropic retrovirus receptor 1
Tssr14354 1 155276376 to 155276381 5 - TSS region transcription start site region 14354
Tssr14355 1 155279356 to 155279370 14 - TSS region transcription start site region 14355
Tssr14356 1 155279407 to 155279424 17 - TSS region transcription start site region 14356
Tssr14357 1 155280434 to 155280438 4 - TSS region transcription start site region 14357
Gm22569 1 155315966 to 155316089 123 + miRNA gene predicted gene, 22569
D1Dcr13 1 155339386 to 155339486 100 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 13
Gm17974 1 155348551 to 155349053 502 + pseudogene predicted gene, 17974
Cpgi885 1 155416689 to 155417669 980 CpG island CpG island 885
Tssr14358 1 155417261 to 155417272 11 - TSS region transcription start site region 14358
Tssr14359 1 155417283 to 155417323 40 - TSS region transcription start site region 14359
Tssr14360 1 155417336 to 155417358 22 - TSS region transcription start site region 14360
Tssr14361 1 155417366 to 155417386 20 - TSS region transcription start site region 14361
Tssr14362 1 155417394 to 155417435 41 - TSS region transcription start site region 14362
D1Dcr14 1 155426075 to 155426170 95 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 14
Gm31713 1 155427015 to 155438508 11493 - lncRNA gene predicted gene, 31713
Tssr9536 1 155447467 to 155447483 16 + TSS region transcription start site region 9536
Gm31772 1 155449553 to 155459769 10216 + lncRNA gene predicted gene, 31772