Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:152801733-153004104

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ncf2 1 152800194 to 152836991 36797 + protein coding gene neutrophil cytosolic factor 2
Tssr9423 1 152807772 to 152807790 18 + TSS region transcription start site region 9423
Tssr9424 1 152807819 to 152807826 7 + TSS region transcription start site region 9424
Tssr9425 1 152807827 to 152807876 49 + TSS region transcription start site region 9425
Tssr9426 1 152807877 to 152807898 21 + TSS region transcription start site region 9426
Tssr9427 1 152807905 to 152807916 11 + TSS region transcription start site region 9427
Tssr9428 1 152807918 to 152807934 16 + TSS region transcription start site region 9428
Tssr9429 1 152807948 to 152807959 11 + TSS region transcription start site region 9429
Tssr14234 1 152808310 to 152808313 3 - TSS region transcription start site region 14234
Tssr14235 1 152809924 to 152809929 5 - TSS region transcription start site region 14235
Tssr9430 1 152810107 to 152810120 13 + TSS region transcription start site region 9430
Tssr14236 1 152810609 to 152810617 8 - TSS region transcription start site region 14236
Tssr9431 1 152811416 to 152811441 25 + TSS region transcription start site region 9431
Tssr9432 1 152811611 to 152811631 20 + TSS region transcription start site region 9432
Tssr9433 1 152812473 to 152812492 19 + TSS region transcription start site region 9433
Tssr9434 1 152812505 to 152812517 12 + TSS region transcription start site region 9434
Tssr9435 1 152817441 to 152817445 4 + TSS region transcription start site region 9435
Tssr9436 1 152824753 to 152824758 5 + TSS region transcription start site region 9436
Smg7 1 152836995 to 152902646 65651 - protein coding gene Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
Tssr14237 1 152837501 to 152837518 17 - TSS region transcription start site region 14237
Tssr14238 1 152857409 to 152857421 12 - TSS region transcription start site region 14238
Tssr14239 1 152871186 to 152871230 44 - TSS region transcription start site region 14239
Gm28791 1 152878520 to 152880298 1778 - sense intronic lncRNA gene predicted gene 28791
Tssr14240 1 152880269 to 152880273 4 - TSS region transcription start site region 14240
Tssr14241 1 152882814 to 152882817 3 - TSS region transcription start site region 14241
D1Mit502 1 152901644 to 152901761 117 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 502
Cpgi860 1 152901733 to 152904104 2371 CpG island CpG island 860
Tssr14242 1 152902628 to 152902669 41 - TSS region transcription start site region 14242
Tssr14243 1 152902736 to 152902750 14 - TSS region transcription start site region 14243
Tssr14244 1 152902757 to 152902779 22 - TSS region transcription start site region 14244
Tssr9437 1 152902844 to 152902873 29 + TSS region transcription start site region 9437
Tssr9438 1 152902897 to 152902922 25 + TSS region transcription start site region 9438
Tssr14245 1 152903063 to 152903087 24 - TSS region transcription start site region 14245
Tssr14246 1 152903088 to 152903118 30 - TSS region transcription start site region 14246
Tssr9439 1 152903803 to 152903814 11 + TSS region transcription start site region 9439
Cpgi861 1 152904686 to 152904858 172 CpG island CpG island 861
D1Mit47 1 152919071 to 152919261 190 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 47
Skts8 1 152919071 to 152919261 190 QTL skin tumor susceptibility 8
Nba10 1 152919071 to 186706423 33787352 QTL New Zealand Black autoimmunity 10
1700040K01Rik 1 152936604 to 152937041 437 + lncRNA gene RIKEN cDNA 1700040K01 gene
Gm8976 1 152949395 to 152950097 702 - pseudogene predicted gene 8976
Cpgi862 1 152954811 to 152956457 1646 CpG island CpG island 862
Tssr9440 1 152954966 to 152955059 93 + TSS region transcription start site region 9440
Nmnat2 1 152954993 to 153119261 164268 + protein coding gene nicotinamide nucleotide adenylyltransferase 2
D1Mit500 1 153002150 to 153002264 114 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 500
Lore8 1 153002150 to 153002264 114 QTL loss of righting induced by ethanol 8
D1Dcr12 1 153002158 to 153002254 96 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 12