Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:152681542-152860580

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rgl1 1 152516762 to 152766270 249508 - protein coding gene ral guanine nucleotide dissociation stimulator,-like 1
Tssr9413 1 152682992 to 152683003 11 + TSS region transcription start site region 9413
Tssr9414 1 152683009 to 152683026 17 + TSS region transcription start site region 9414
Tssr246 1 152683071 to 152683091 20 + TSS region transcription start site region 246
Gm15479 1 152684026 to 152687501 3475 - sense intronic lncRNA gene predicted gene 15479
Gm7278 1 152729162 to 152730559 1397 - pseudogene predicted gene 7278
Cpgi858 1 152730829 to 152730984 155 CpG island CpG island 858
Gm28792 1 152731206 to 152751824 20618 - sense intronic lncRNA gene predicted gene 28792
Tssr9415 1 152750523 to 152750526 3 + TSS region transcription start site region 9415
Tssr9416 1 152750527 to 152750553 26 + TSS region transcription start site region 9416
Apobec4 1 152750551 to 152757544 6993 + protein coding gene apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)
Tssr9417 1 152750554 to 152750564 10 + TSS region transcription start site region 9417
Cpgi859 1 152765903 to 152767272 1369 CpG island CpG island 859
Tssr14231 1 152766281 to 152766319 38 - TSS region transcription start site region 14231
Tssr14232 1 152766323 to 152766352 29 - TSS region transcription start site region 14232
Tssr14233 1 152766356 to 152766367 11 - TSS region transcription start site region 14233
Tssr9418 1 152766540 to 152766551 11 + TSS region transcription start site region 9418
Arpc5 1 152766542 to 152775580 9038 + protein coding gene actin related protein 2/3 complex, subunit 5
Tssr9419 1 152766591 to 152766687 96 + TSS region transcription start site region 9419
Tssr9420 1 152766693 to 152766710 17 + TSS region transcription start site region 9420
Tssr9421 1 152767989 to 152767994 5 + TSS region transcription start site region 9421
Tssr9422 1 152791895 to 152791904 9 + TSS region transcription start site region 9422
Ncf2 1 152800194 to 152836991 36797 + protein coding gene neutrophil cytosolic factor 2
Tssr9423 1 152807772 to 152807790 18 + TSS region transcription start site region 9423
Tssr9424 1 152807819 to 152807826 7 + TSS region transcription start site region 9424
Tssr9425 1 152807827 to 152807876 49 + TSS region transcription start site region 9425
Tssr9426 1 152807877 to 152807898 21 + TSS region transcription start site region 9426
Tssr9427 1 152807905 to 152807916 11 + TSS region transcription start site region 9427
Tssr9428 1 152807918 to 152807934 16 + TSS region transcription start site region 9428
Tssr9429 1 152807948 to 152807959 11 + TSS region transcription start site region 9429
Tssr14234 1 152808310 to 152808313 3 - TSS region transcription start site region 14234
Tssr14235 1 152809924 to 152809929 5 - TSS region transcription start site region 14235
Tssr9430 1 152810107 to 152810120 13 + TSS region transcription start site region 9430
Tssr14236 1 152810609 to 152810617 8 - TSS region transcription start site region 14236
Tssr9431 1 152811416 to 152811441 25 + TSS region transcription start site region 9431
Tssr9432 1 152811611 to 152811631 20 + TSS region transcription start site region 9432
Tssr9433 1 152812473 to 152812492 19 + TSS region transcription start site region 9433
Tssr9434 1 152812505 to 152812517 12 + TSS region transcription start site region 9434
Tssr9435 1 152817441 to 152817445 4 + TSS region transcription start site region 9435
Tssr9436 1 152824753 to 152824758 5 + TSS region transcription start site region 9436
Smg7 1 152836995 to 152902646 65651 - protein coding gene Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
Tssr14237 1 152837501 to 152837518 17 - TSS region transcription start site region 14237
Tssr14238 1 152857409 to 152857421 12 - TSS region transcription start site region 14238