Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:152583009-152783026

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rgl1 1 152516762 to 152766270 249508 - protein coding gene ral guanine nucleotide dissociation stimulator,-like 1
Tssr14225 1 152592762 to 152592779 17 - TSS region transcription start site region 14225
Tssr14226 1 152615161 to 152615167 6 - TSS region transcription start site region 14226
Cpgi857 1 152624566 to 152625640 1074 CpG island CpG island 857
Tssr14227 1 152625076 to 152625085 9 - TSS region transcription start site region 14227
Tssr14228 1 152625124 to 152625138 14 - TSS region transcription start site region 14228
Tssr14229 1 152625153 to 152625174 21 - TSS region transcription start site region 14229
Tssr14230 1 152625212 to 152625220 8 - TSS region transcription start site region 14230
Gm46163 1 152625720 to 152631875 6155 - lncRNA gene predicted gene, 46163
D1Mit501 1 152626381 to 152626502 121 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 501
D1Mit521 1 152674408 to 152674553 145 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology-521
Tssr9413 1 152682992 to 152683003 11 + TSS region transcription start site region 9413
Tssr9414 1 152683009 to 152683026 17 + TSS region transcription start site region 9414
Tssr246 1 152683071 to 152683091 20 + TSS region transcription start site region 246
Gm15479 1 152684026 to 152687501 3475 - sense intronic lncRNA gene predicted gene 15479
Gm7278 1 152729162 to 152730559 1397 - pseudogene predicted gene 7278
Cpgi858 1 152730829 to 152730984 155 CpG island CpG island 858
Gm28792 1 152731206 to 152751824 20618 - sense intronic lncRNA gene predicted gene 28792
Tssr9415 1 152750523 to 152750526 3 + TSS region transcription start site region 9415
Tssr9416 1 152750527 to 152750553 26 + TSS region transcription start site region 9416
Apobec4 1 152750551 to 152757544 6993 + protein coding gene apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)
Tssr9417 1 152750554 to 152750564 10 + TSS region transcription start site region 9417
Cpgi859 1 152765903 to 152767272 1369 CpG island CpG island 859
Tssr14231 1 152766281 to 152766319 38 - TSS region transcription start site region 14231
Tssr14232 1 152766323 to 152766352 29 - TSS region transcription start site region 14232
Tssr14233 1 152766356 to 152766367 11 - TSS region transcription start site region 14233
Tssr9418 1 152766540 to 152766551 11 + TSS region transcription start site region 9418
Arpc5 1 152766542 to 152775580 9038 + protein coding gene actin related protein 2/3 complex, subunit 5
Tssr9419 1 152766591 to 152766687 96 + TSS region transcription start site region 9419
Tssr9420 1 152766693 to 152766710 17 + TSS region transcription start site region 9420
Tssr9421 1 152767989 to 152767994 5 + TSS region transcription start site region 9421