Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:150445266-150963499

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tpr 1 150392838 to 150449935 57097 + protein coding gene translocated promoter region, nuclear basket protein
Tssr9362 1 150448825 to 150448834 9 + TSS region transcription start site region 9362
Tssr9363 1 150448845 to 150448851 6 + TSS region transcription start site region 9363
Tssr9364 1 150449147 to 150449178 31 + TSS region transcription start site region 9364
Prg4 1 150449412 to 150466165 16753 - protein coding gene proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)
Tssr14151 1 150454391 to 150454428 37 - TSS region transcription start site region 14151
Tssr14152 1 150454555 to 150454588 33 - TSS region transcription start site region 14152
Tssr14153 1 150454591 to 150454609 18 - TSS region transcription start site region 14153
Tssr14154 1 150455959 to 150455970 11 - TSS region transcription start site region 14154
Tssr14155 1 150455977 to 150455985 8 - TSS region transcription start site region 14155
Tssr14156 1 150456228 to 150456252 24 - TSS region transcription start site region 14156
Tssr14157 1 150465563 to 150465604 41 - TSS region transcription start site region 14157
Tssr14158 1 150466160 to 150466170 10 - TSS region transcription start site region 14158
Tssr14159 1 150466191 to 150466236 45 - TSS region transcription start site region 14159
Gm41967 1 150472533 to 150474472 1939 + lncRNA gene predicted gene, 41967
Tssr9365 1 150496867 to 150496893 26 + TSS region transcription start site region 9365
Tssr14160 1 150502687 to 150502714 27 - TSS region transcription start site region 14160
Tssr14161 1 150503148 to 150503153 5 - TSS region transcription start site region 14161
Tssr9366 1 150517818 to 150517825 7 + TSS region transcription start site region 9366
Tssr9367 1 150518737 to 150518742 5 + TSS region transcription start site region 9367
Ska2l-ps 1 150549317 to 150549676 359 + pseudogene spindle and kinetochore associated complex subunit 2-like, pseudogene
Gm33818 1 150556237 to 150558703 2466 - pseudogene predicted gene, 33818
Hmcn1 1 150562524 to 150993435 430911 - protein coding gene hemicentin 1
Gm20631 1 150625266 to 150783499 158233 + antisense lncRNA gene predicted gene 20631
Tssr9368 1 150625290 to 150625301 11 + TSS region transcription start site region 9368
Tssr14162 1 150653880 to 150653886 6 - TSS region transcription start site region 14162
Tssr14163 1 150724744 to 150724750 6 - TSS region transcription start site region 14163
Cfq5 1 150730586 to 159479894 8749308 QTL conditioned fear QTL 5
Tssr244 1 150748616 to 150748618 2 + TSS region transcription start site region 244
D1Dcr2 1 150784655 to 150784766 111 DNA segment DNA segment, Chr 1, Derry C. Roopenian 2
D1Mit346 1 150784679 to 150784828 149 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 346
Tssr14164 1 150797219 to 150797222 3 - TSS region transcription start site region 14164
Tssr9369 1 150847353 to 150847354 1 + TSS region transcription start site region 9369
D1Mit195 1 150890742 to 150890918 176 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 195