Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:139068285-139468289

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dennd1b 1 138963220 to 139176043 212823 + protein coding gene DENN/MADD domain containing 1B
Gm43544 1 139070213 to 139072684 2471 + unclassified gene predicted gene 43544
Gm37655 1 139082862 to 139086984 4122 - unclassified gene predicted gene, 37655
Gm16304 1 139133891 to 139134665 774 - pseudogene predicted gene 16304
Gm37718 1 139155152 to 139157782 2630 + unclassified gene predicted gene, 37718
Gm41960 1 139163918 to 139167691 3773 - lncRNA gene predicted gene, 41960
Tssr9170 1 139172060 to 139172072 12 + TSS region transcription start site region 9170
Crb1 1 139197056 to 139377100 180044 - protein coding gene crumbs family member 1, photoreceptor morphogenesis associated
Tssr14054 1 139214802 to 139214805 3 - TSS region transcription start site region 14054
Tssr14055 1 139255674 to 139255683 9 - TSS region transcription start site region 14055
Tssr14056 1 139255711 to 139255728 17 - TSS region transcription start site region 14056
Tssr14057 1 139255755 to 139255765 10 - TSS region transcription start site region 14057
Tssr9171 1 139268285 to 139268289 4 + TSS region transcription start site region 9171
D1Mit394 1 139280373 to 139280497 124 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 394
Tssr14058 1 139304767 to 139304774 7 - TSS region transcription start site region 14058
Tssr14059 1 139376969 to 139376983 14 - TSS region transcription start site region 14059
Tssr14060 1 139377019 to 139377034 15 - TSS region transcription start site region 14060
Tssr14061 1 139377047 to 139377078 31 - TSS region transcription start site region 14061
Tssr14062 1 139377094 to 139377110 16 - TSS region transcription start site region 14062
4933436E23Rik 1 139379452 to 139402852 23400 + lincRNA gene RIKEN cDNA 4933436E23 gene
Gm34816 1 139408280 to 139413864 5584 + lincRNA gene predicted gene, 34816
D1Mit422 1 139410632 to 139410748 116 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 422
Cpgi832 1 139421686 to 139422856 1170 CpG island CpG island 832
Tssr9172 1 139422196 to 139422263 67 + TSS region transcription start site region 9172
Zbtb41 1 139422288 to 139453005 30717 + protein coding gene zinc finger and BTB domain containing 41
Gm41962 1 139424883 to 139435956 11073 - lncRNA gene predicted gene, 41962
Tssr14063 1 139436889 to 139436909 20 - TSS region transcription start site region 14063
Cpgi833 1 139454535 to 139455561 1026 CpG island CpG island 833
Tssr9173 1 139454747 to 139454825 78 + TSS region transcription start site region 9173
Aspm 1 139454772 to 139494091 39319 + protein coding gene abnormal spindle microtubule assembly
Tssr9174 1 139454828 to 139454842 14 + TSS region transcription start site region 9174
Tssr9175 1 139454845 to 139454869 24 + TSS region transcription start site region 9175