Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:138920213-139222684

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr9163 1 138960155 to 138960175 20 + TSS region transcription start site region 9163
Tssr9164 1 138960176 to 138960187 11 + TSS region transcription start site region 9164
Gm37045 1 138960441 to 138962903 2462 - unclassified gene predicted gene, 37045
Cpgi831 1 138963059 to 138964308 1249 CpG island CpG island 831
Dennd1b 1 138963220 to 139176043 212823 + protein coding gene DENN/MADD domain containing 1B
Tssr9165 1 138963417 to 138963472 55 + TSS region transcription start site region 9165
Tssr9166 1 138963629 to 138963684 55 + TSS region transcription start site region 9166
Tssr9167 1 138963717 to 138963808 91 + TSS region transcription start site region 9167
Gm37423 1 138968510 to 138971851 3341 + unclassified non-coding RNA gene predicted gene, 37423
Tssr9168 1 138971234 to 138971245 11 + TSS region transcription start site region 9168
4930596I21Rik 1 138977657 to 138979246 1589 + sense intronic lncRNA gene RIKEN cDNA 4930596I21 gene
Gm18553 1 138983872 to 138984480 608 - pseudogene predicted gene, 18553
Gm16305 1 138991514 to 138992069 555 - pseudogene predicted gene 16305
Gm37470 1 139030185 to 139032982 2797 + unclassified gene predicted gene, 37470
Tssr9169 1 139056758 to 139056763 5 + TSS region transcription start site region 9169
Gm43544 1 139070213 to 139072684 2471 + unclassified gene predicted gene 43544
Gm37655 1 139082862 to 139086984 4122 - unclassified gene predicted gene, 37655
Gm16304 1 139133891 to 139134665 774 - pseudogene predicted gene 16304
Gm37718 1 139155152 to 139157782 2630 + unclassified gene predicted gene, 37718
Gm41960 1 139163918 to 139167691 3773 - lncRNA gene predicted gene, 41960
Tssr9170 1 139172060 to 139172072 12 + TSS region transcription start site region 9170
Crb1 1 139197056 to 139377100 180044 - protein coding gene crumbs family member 1, photoreceptor morphogenesis associated
Tssr14054 1 139214802 to 139214805 3 - TSS region transcription start site region 14054