Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:138855441-139067903

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
2310009B15Rik 1 138851983 to 138856852 4869 - protein coding gene RIKEN cDNA 2310009B15 gene
Cpgi830 1 138856500 to 138856964 464 CpG island CpG island 830
Tssr14052 1 138856819 to 138856848 29 - TSS region transcription start site region 14052
1700019P21Rik 1 138876272 to 138876951 679 - lincRNA gene RIKEN cDNA 1700019P21 gene
Tssr14053 1 138876930 to 138876952 22 - TSS region transcription start site region 14053
n-R5s217 1 138878262 to 138878377 115 - rRNA gene nuclear encoded rRNA 5S 217
Tssr9162 1 138913657 to 138913662 5 + TSS region transcription start site region 9162
Gm3933 1 138915605 to 138916043 438 - pseudogene predicted gene 3933
Tssr9163 1 138960155 to 138960175 20 + TSS region transcription start site region 9163
Tssr9164 1 138960176 to 138960187 11 + TSS region transcription start site region 9164
Gm37045 1 138960441 to 138962903 2462 - unclassified gene predicted gene, 37045
Cpgi831 1 138963059 to 138964308 1249 CpG island CpG island 831
Dennd1b 1 138963220 to 139176043 212823 + protein coding gene DENN/MADD domain containing 1B
Tssr9165 1 138963417 to 138963472 55 + TSS region transcription start site region 9165
Tssr9166 1 138963629 to 138963684 55 + TSS region transcription start site region 9166
Tssr9167 1 138963717 to 138963808 91 + TSS region transcription start site region 9167
Gm37423 1 138968510 to 138971851 3341 + unclassified non-coding RNA gene predicted gene, 37423
Tssr9168 1 138971234 to 138971245 11 + TSS region transcription start site region 9168
4930596I21Rik 1 138977657 to 138979246 1589 + sense intronic lncRNA gene RIKEN cDNA 4930596I21 gene
Gm18553 1 138983872 to 138984480 608 - pseudogene predicted gene, 18553
Gm16305 1 138991514 to 138992069 555 - pseudogene predicted gene 16305
Gm37470 1 139030185 to 139032982 2797 + unclassified gene predicted gene, 37470
Tssr9169 1 139056758 to 139056763 5 + TSS region transcription start site region 9169