Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:136246074-136446145

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr13928 1 136246753 to 136246756 3 - TSS region transcription start site region 13928
Tssr230 1 136247454 to 136247461 7 - TSS region transcription start site region 230
Tssr13929 1 136247478 to 136247507 29 - TSS region transcription start site region 13929
Tssr13930 1 136247537 to 136247551 14 - TSS region transcription start site region 13930
A430034D21Rik 1 136247662 to 136250476 2814 + lincRNA gene RIKEN cDNA A430034D21 gene
Tssr9052 1 136247679 to 136247701 22 + TSS region transcription start site region 9052
Gm37552 1 136252671 to 136255846 3175 - lincRNA gene predicted gene, 37552
Tssr13931 1 136255750 to 136255771 21 - TSS region transcription start site region 13931
Tssr13932 1 136255858 to 136255876 18 - TSS region transcription start site region 13932
Tssr9053 1 136259397 to 136259425 28 + TSS region transcription start site region 9053
Gm26781 1 136259407 to 136274406 14999 + antisense lncRNA gene predicted gene, 26781
Tssr9054 1 136259432 to 136259462 30 + TSS region transcription start site region 9054
Cpgi810 1 136259444 to 136261091 1647 CpG island CpG island 810
Tssr9055 1 136259657 to 136259688 31 + TSS region transcription start site region 9055
Gpr25 1 136259797 to 136260873 1076 - protein coding gene G protein-coupled receptor 25
Tssr13933 1 136260367 to 136260439 72 - TSS region transcription start site region 13933
Tssr13934 1 136260916 to 136260931 15 - TSS region transcription start site region 13934
Camsap2 1 136268123 to 136346104 77981 - protein coding gene calmodulin regulated spectrin-associated protein family, member 2
Tssr9056 1 136279979 to 136279983 4 + TSS region transcription start site region 9056
Tssr13935 1 136280545 to 136280562 17 - TSS region transcription start site region 13935
Tssr13936 1 136280583 to 136280601 18 - TSS region transcription start site region 13936
D1Mit197 1 136335221 to 136335352 131 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 197
Tssr9057 1 136345116 to 136345120 4 + TSS region transcription start site region 9057
Cpgi811 1 136345174 to 136346715 1541 CpG island CpG island 811
Tssr13937 1 136345781 to 136345810 29 - TSS region transcription start site region 13937
Tssr13938 1 136345967 to 136345983 16 - TSS region transcription start site region 13938
Tssr13939 1 136346074 to 136346145 71 - TSS region transcription start site region 13939
Tssr9058 1 136364973 to 136364985 12 + TSS region transcription start site region 9058
Tssr9059 1 136364989 to 136365021 32 + TSS region transcription start site region 9059
Tssr9060 1 136365057 to 136365063 6 + TSS region transcription start site region 9060
9230116N13Rik 1 136411916 to 136415519 3603 - lncRNA gene RIKEN cDNA 9230116N13 gene
Cpgi812 1 136414942 to 136415766 824 CpG island CpG island 812
Tssr13940 1 136414957 to 136414980 23 - TSS region transcription start site region 13940
Tssr9061 1 136415267 to 136415278 11 + TSS region transcription start site region 9061
Ddx59 1 136415271 to 136440158 24887 + protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 59
Tssr9062 1 136415289 to 136415337 48 + TSS region transcription start site region 9062
Tssr9063 1 136415339 to 136415353 14 + TSS region transcription start site region 9063
Tssr13941 1 136415508 to 136415530 22 - TSS region transcription start site region 13941