Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:135598988-135799592

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nav1 1 135434580 to 135607295 172715 - protein coding gene neuron navigator 1
Gm4793 1 135584773 to 135599948 15175 + antisense lncRNA gene predicted gene 4793
Tssr13876 1 135603216 to 135603223 7 - TSS region transcription start site region 13876
Tssr13877 1 135603243 to 135603261 18 - TSS region transcription start site region 13877
Gm38399 1 135606447 to 135688105 81658 - lincRNA gene predicted gene, 38399
Tssr13878 1 135607548 to 135607561 13 - TSS region transcription start site region 13878
Tssr13879 1 135631219 to 135631224 5 - TSS region transcription start site region 13879
Tssr8961 1 135631749 to 135631773 24 + TSS region transcription start site region 8961
Tssr13880 1 135634040 to 135634051 11 - TSS region transcription start site region 13880
Tssr13881 1 135660264 to 135660277 13 - TSS region transcription start site region 13881
Tssr8962 1 135673718 to 135673738 20 + TSS region transcription start site region 8962
Tssr13882 1 135679234 to 135679264 30 - TSS region transcription start site region 13882
Tssr13883 1 135685337 to 135685372 35 - TSS region transcription start site region 13883
Tssr8963 1 135686906 to 135686929 23 + TSS region transcription start site region 8963
Tssr8964 1 135687074 to 135687088 14 + TSS region transcription start site region 8964
Tssr8965 1 135687106 to 135687117 11 + TSS region transcription start site region 8965
Cpgi794 1 135687322 to 135688700 1378 CpG island CpG island 794
D1Mit498 1 135687493 to 135687641 148 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 498
Popoa 1 135687641 to 82665468 -53022173 QTL premature ovulation and primary oocyte arrest
Tssr13884 1 135688094 to 135688149 55 - TSS region transcription start site region 13884
Gm32835 1 135688306 to 135691947 3641 + lncRNA gene predicted gene, 32835
Tssr13885 1 135688818 to 135688852 34 - TSS region transcription start site region 13885
Cpgi795 1 135698988 to 135699592 604 CpG island CpG island 795
Tssr8966 1 135711372 to 135711395 23 + TSS region transcription start site region 8966
Tssr8967 1 135719795 to 135719815 20 + TSS region transcription start site region 8967
Cpgi796 1 135729017 to 135729514 497 CpG island CpG island 796
Csrp1 1 135729197 to 135752229 23032 + protein coding gene cysteine and glycine-rich protein 1
Tssr8968 1 135729213 to 135729234 21 + TSS region transcription start site region 8968
Tssr8969 1 135739474 to 135739482 8 + TSS region transcription start site region 8969
Tssr8970 1 135740715 to 135740719 4 + TSS region transcription start site region 8970
Tssr222 1 135746770 to 135746798 28 + TSS region transcription start site region 222
Tssr8971 1 135750598 to 135750615 17 + TSS region transcription start site region 8971
Tssr8972 1 135751091 to 135751107 16 + TSS region transcription start site region 8972
Tssr8973 1 135751170 to 135751210 40 + TSS region transcription start site region 8973
Cpgi797 1 135765539 to 135766978 1439 CpG island CpG island 797
Tssr223 1 135766070 to 135766079 9 + TSS region transcription start site region 223
Tssr8974 1 135766085 to 135766175 90 + TSS region transcription start site region 8974
Phlda3 1 135766119 to 135769136 3017 + protein coding gene pleckstrin homology like domain, family A, member 3
Tssr224 1 135766189 to 135766201 12 + TSS region transcription start site region 224
Tssr8975 1 135766207 to 135766208 1 + TSS region transcription start site region 8975
Tssr8976 1 135766218 to 135766225 7 + TSS region transcription start site region 8976
Tssr8977 1 135766237 to 135766240 3 + TSS region transcription start site region 8977
Tssr8978 1 135766241 to 135766257 16 + TSS region transcription start site region 8978
Tssr8979 1 135767809 to 135767830 21 + TSS region transcription start site region 8979
Tnni1 1 135783033 to 135810989 27956 + protein coding gene troponin I, skeletal, slow 1
Tssr8980 1 135783133 to 135783143 10 + TSS region transcription start site region 8980
Cpgi798 1 135793729 to 135794015 286 CpG island CpG island 798
Tssr8981 1 135799433 to 135799480 47 + TSS region transcription start site region 8981
Tssr8982 1 135799490 to 135799499 9 + TSS region transcription start site region 8982