Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:132577236-132997842

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nfasc 1 132564690 to 132741797 177107 - protein coding gene neurofascin
Tssr13658 1 132617008 to 132617012 4 - TSS region transcription start site region 13658
Tssr13659 1 132624473 to 132624490 17 - TSS region transcription start site region 13659
Tssr13660 1 132627044 to 132627048 4 - TSS region transcription start site region 13660
Tssr13661 1 132634205 to 132634222 17 - TSS region transcription start site region 13661
Tssr13662 1 132634690 to 132634693 3 - TSS region transcription start site region 13662
Gm46157 1 132665597 to 132679653 14056 + lncRNA gene predicted gene, 46157
Tssr13663 1 132707249 to 132707283 34 - TSS region transcription start site region 13663
Tssr13664 1 132707304 to 132707317 13 - TSS region transcription start site region 13664
Tssr13665 1 132707339 to 132707351 12 - TSS region transcription start site region 13665
Tssr8750 1 132729326 to 132729369 43 + TSS region transcription start site region 8750
Gm10538 1 132729355 to 132732826 3471 + antisense lncRNA gene predicted gene 10538
Cpgi734 1 132741179 to 132742065 886 CpG island CpG island 734
Tssr13666 1 132741750 to 132741806 56 - TSS region transcription start site region 13666
Cpgi735 1 132758720 to 132758936 216 CpG island CpG island 735
Gm31101 1 132787236 to 132787842 606 + lncRNA gene predicted gene, 31101
Gm22609 1 132814228 to 132814348 120 - snoRNA gene predicted gene, 22609
Tssr8751 1 132865812 to 132865823 11 + TSS region transcription start site region 8751
Tssr8752 1 132865828 to 132865839 11 + TSS region transcription start site region 8752
Tssr13667 1 132866801 to 132866814 13 - TSS region transcription start site region 13667
Cpgi736 1 132879879 to 132881701 1822 CpG island CpG island 736
Tssr8753 1 132880319 to 132880339 20 + TSS region transcription start site region 8753
Tssr8754 1 132880344 to 132880366 22 + TSS region transcription start site region 8754
Lrrn2 1 132880355 to 132940005 59650 + protein coding gene leucine rich repeat protein 2, neuronal
Tssr8755 1 132880400 to 132880454 54 + TSS region transcription start site region 8755
Tssr8756 1 132880506 to 132880517 11 + TSS region transcription start site region 8756
Gm31159 1 132914953 to 132924436 9483 - lncRNA gene predicted gene, 31159
Gm44300 1 132923624 to 132923744 120 - miRNA gene predicted gene, 44300
Cpgi737 1 132938210 to 132938751 541 CpG island CpG island 737
Gm38308 1 132943512 to 132945320 1808 - unclassified gene predicted gene, 38308
Tssr8757 1 132958050 to 132958055 5 + TSS region transcription start site region 8757
Gm38687 1 132961650 to 132971688 10038 - lncRNA gene predicted gene, 38687
Mdm4 1 132986105 to 133030587 44482 - protein coding gene transformed mouse 3T3 cell double minute 4