Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:132475597-132869653

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
6030442K20Rik 1 132466433 to 132477064 10631 - unclassified gene RIKEN cDNA 6030442K20 gene
Cpgi731 1 132476966 to 132477702 736 CpG island CpG island 731
Tssr8748 1 132477361 to 132477412 51 + TSS region transcription start site region 8748
Rbbp5 1 132477365 to 132505659 28294 + protein coding gene retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit
Tmem81 1 132506230 to 132508639 2409 + protein coding gene transmembrane protein 81
Tssr8749 1 132506247 to 132506259 12 + TSS region transcription start site region 8749
Cntn2 1 132509425 to 132543251 33826 - protein coding gene contactin 2
Cpgi732 1 132518719 to 132518902 183 CpG island CpG island 732
Tssr13652 1 132523681 to 132523706 25 - TSS region transcription start site region 13652
Tssr13653 1 132529021 to 132529025 4 - TSS region transcription start site region 13653
Cpgi733 1 132542696 to 132543112 416 CpG island CpG island 733
Tssr13654 1 132542857 to 132542878 21 - TSS region transcription start site region 13654
Tssr13655 1 132542882 to 132542906 24 - TSS region transcription start site region 13655
Tssr13656 1 132542934 to 132542954 20 - TSS region transcription start site region 13656
Nfasc 1 132564690 to 132741797 177107 - protein coding gene neurofascin
Tssr13657 1 132567003 to 132567016 13 - TSS region transcription start site region 13657
Tssr13658 1 132617008 to 132617012 4 - TSS region transcription start site region 13658
Tssr13659 1 132624473 to 132624490 17 - TSS region transcription start site region 13659
Tssr13660 1 132627044 to 132627048 4 - TSS region transcription start site region 13660
Tssr13661 1 132634205 to 132634222 17 - TSS region transcription start site region 13661
Tssr13662 1 132634690 to 132634693 3 - TSS region transcription start site region 13662
Gm46157 1 132665597 to 132679653 14056 + lncRNA gene predicted gene, 46157
Tssr13663 1 132707249 to 132707283 34 - TSS region transcription start site region 13663
Tssr13664 1 132707304 to 132707317 13 - TSS region transcription start site region 13664
Tssr13665 1 132707339 to 132707351 12 - TSS region transcription start site region 13665
Tssr8750 1 132729326 to 132729369 43 + TSS region transcription start site region 8750
Gm10538 1 132729355 to 132732826 3471 + antisense lncRNA gene predicted gene 10538
Cpgi734 1 132741179 to 132742065 886 CpG island CpG island 734
Tssr13666 1 132741750 to 132741806 56 - TSS region transcription start site region 13666
Cpgi735 1 132758720 to 132758936 216 CpG island CpG island 735
Gm31101 1 132787236 to 132787842 606 + lncRNA gene predicted gene, 31101
Gm22609 1 132814228 to 132814348 120 - snoRNA gene predicted gene, 22609
Tssr8751 1 132865812 to 132865823 11 + TSS region transcription start site region 8751
Tssr8752 1 132865828 to 132865839 11 + TSS region transcription start site region 8752
Tssr13667 1 132866801 to 132866814 13 - TSS region transcription start site region 13667