Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:131160597-131390615

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eif2d 1 131153181 to 131187658 34477 + protein coding gene eukaryotic translation initiation factor 2D
Tssr8623 1 131161266 to 131161288 22 + TSS region transcription start site region 8623
Rassf5 1 131176410 to 131245178 68768 - protein coding gene Ras association (RalGDS/AF-6) domain family member 5
Cpgi708 1 131199803 to 131200014 211 CpG island CpG island 708
Tssr13558 1 131199919 to 131199928 9 - TSS region transcription start site region 13558
Tssr13559 1 131199932 to 131199952 20 - TSS region transcription start site region 13559
Tssr13560 1 131199959 to 131199975 16 - TSS region transcription start site region 13560
Tssr13561 1 131199987 to 131199992 5 - TSS region transcription start site region 13561
Tssr13562 1 131200089 to 131200145 56 - TSS region transcription start site region 13562
Tssr13563 1 131200166 to 131200177 11 - TSS region transcription start site region 13563
Tssr13564 1 131200181 to 131200188 7 - TSS region transcription start site region 13564
Tssr13565 1 131200204 to 131200215 11 - TSS region transcription start site region 13565
Tssr8624 1 131204699 to 131204739 40 + TSS region transcription start site region 8624
Gm17796 1 131216877 to 131218089 1212 + pseudogene predicted gene, 17796
D1Mit193 1 131228571 to 131228693 122 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 193
Ity3 1 131228571 to 165311895 34083324 QTL immunity to S. typhimurium 3
Tssr13566 1 131233660 to 131233679 19 - TSS region transcription start site region 13566
Cpgi709 1 131244097 to 131245843 1746 CpG island CpG island 709
Tssr13567 1 131245167 to 131245185 18 - TSS region transcription start site region 13567
Tssr8625 1 131245323 to 131245334 11 + TSS region transcription start site region 8625
Ikbke 1 131254600 to 131279629 25029 - protein coding gene inhibitor of kappaB kinase epsilon
Gm28914 1 131259507 to 131260553 1046 + antisense lncRNA gene predicted gene 28914
Gm28913 1 131263330 to 131266749 3419 + antisense lncRNA gene predicted gene 28913
Tssr13568 1 131271862 to 131271878 16 - TSS region transcription start site region 13568
Tssr13569 1 131273475 to 131273486 11 - TSS region transcription start site region 13569
Tssr13570 1 131275277 to 131275305 28 - TSS region transcription start site region 13570
Tssr8626 1 131275597 to 131275615 18 + TSS region transcription start site region 8626
Cpgi710 1 131275722 to 131275876 154 CpG island CpG island 710
Tssr13571 1 131276685 to 131276720 35 - TSS region transcription start site region 13571
Tssr13572 1 131276797 to 131276813 16 - TSS region transcription start site region 13572
Tssr13573 1 131276877 to 131276888 11 - TSS region transcription start site region 13573
Tssr13574 1 131276895 to 131276906 11 - TSS region transcription start site region 13574
Tssr13575 1 131276914 to 131276925 11 - TSS region transcription start site region 13575
Tssr13576 1 131278756 to 131278768 12 - TSS region transcription start site region 13576
Tssr13577 1 131279515 to 131279529 14 - TSS region transcription start site region 13577
Tssr13578 1 131279544 to 131279570 26 - TSS region transcription start site region 13578
Tssr13579 1 131281893 to 131281903 10 - TSS region transcription start site region 13579
Srgap2 1 131285251 to 131527352 242101 - protein coding gene SLIT-ROBO Rho GTPase activating protein 2
Gm38262 1 131341302 to 131342683 1381 - unclassified gene predicted gene, 38262
Gm37954 1 131376461 to 131378531 2070 - unclassified gene predicted gene, 37954