Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:129080815-130643045

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sbw1 1 129203268 to 129203348 80 QTL splenomegaly-NZB x NZW 1
D1Nds1 1 129203268 to 129203348 80 DNA segment DNA segment, Chr 1, Nuffield Department of Surgery 1
D1Mit262 1 129268518 to 129268667 149 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 262
D1Mit262.1 1 129268628 to 129268761 133 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 262.1
Cpgi699 1 129273117 to 129273820 703 CpG island CpG island 699
Thsd7b 1 129273304 to 130219278 945974 + protein coding gene thrombospondin, type I, domain containing 7B
Tssr8548 1 129273436 to 129273470 34 + TSS region transcription start site region 8548
Tssr8549 1 129273471 to 129273482 11 + TSS region transcription start site region 8549
Tssr8550 1 129273491 to 129273498 7 + TSS region transcription start site region 8550
Gm38240 1 129283107 to 129285593 2486 + unclassified gene predicted gene, 38240
Gm38330 1 129372304 to 129373262 958 + unclassified gene predicted gene, 38330
Tssr13489 1 129550314 to 129550340 26 - TSS region transcription start site region 13489
Cpgi700 1 129595479 to 129595663 184 CpG island CpG island 700
Gm36347 1 129608725 to 129616189 7464 - lncRNA gene predicted gene, 36347
Tssr13490 1 129616192 to 129616246 54 - TSS region transcription start site region 13490
Tssr13491 1 129680638 to 129680643 5 - TSS region transcription start site region 13491
Tssr13492 1 129680686 to 129680711 25 - TSS region transcription start site region 13492
Tssr8551 1 129680996 to 129681007 11 + TSS region transcription start site region 8551
Gm36951 1 129710543 to 129713229 2686 + unclassified gene predicted gene, 36951
D1Mit229 1 129747076 to 129747214 138 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 229
Gm15790 1 129796608 to 129797858 1250 - pseudogene predicted pseudogene 15790
Rpl31-ps9 1 129801387 to 129801764 377 - pseudogene ribosomal protein L31, pseudogene 9
Gm37479 1 129833148 to 129836988 3840 + unclassified gene predicted gene, 37479
Gm37064 1 129860815 to 129863045 2230 + unclassified gene predicted gene, 37064
Gm37278 1 129943162 to 129946033 2871 + unclassified gene predicted gene, 37278
Tssr8552 1 130163827 to 130163834 7 + TSS region transcription start site region 8552
Tssr8553 1 130163856 to 130163867 11 + TSS region transcription start site region 8553
Gm29428 1 130195980 to 130196388 408 + pseudogene predicted gene 29428
Gm16081 1 130269950 to 130281258 11308 - lincRNA gene predicted gene 16081
Gm41951 1 130302361 to 130308831 6470 + lncRNA gene predicted gene, 41951
Cd55b 1 130388537 to 130423009 34472 - protein coding gene CD55 molecule, decay accelerating factor for complement B
Tssr13493 1 130422719 to 130422739 20 - TSS region transcription start site region 13493
Tssr13494 1 130422747 to 130422759 12 - TSS region transcription start site region 13494
Tssr13495 1 130422770 to 130422792 22 - TSS region transcription start site region 13495
Gm15674 1 130422824 to 130437914 15090 + antisense lncRNA gene predicted gene 15674
Tssr13496 1 130423022 to 130423065 43 - TSS region transcription start site region 13496
Tssr13497 1 130423066 to 130423082 16 - TSS region transcription start site region 13497
Gm15675 1 130429781 to 130437191 7410 - lincRNA gene predicted gene 15675
Cd55 1 130439027 to 130462744 23717 - protein coding gene CD55 molecule, decay accelerating factor for complement
Tssr13498 1 130448720 to 130448734 14 - TSS region transcription start site region 13498
Tssr13499 1 130448998 to 130449027 29 - TSS region transcription start site region 13499
Tssr13500 1 130449149 to 130449175 26 - TSS region transcription start site region 13500
Tssr13501 1 130449216 to 130449228 12 - TSS region transcription start site region 13501
Tssr13502 1 130449267 to 130449279 12 - TSS region transcription start site region 13502
Tssr13503 1 130452518 to 130452530 12 - TSS region transcription start site region 13503
Cpgi701 1 130462215 to 130462810 595 CpG island CpG island 701
Tssr8554 1 130462272 to 130462312 40 + TSS region transcription start site region 8554
Tssr13504 1 130462470 to 130462519 49 - TSS region transcription start site region 13504
Tssr8555 1 130462558 to 130462609 51 + TSS region transcription start site region 8555
Tssr13505 1 130462680 to 130462771 91 - TSS region transcription start site region 13505
Tssr13506 1 130462984 to 130463008 24 - TSS region transcription start site region 13506
Tssr8556 1 130464106 to 130464113 7 + TSS region transcription start site region 8556
Gm37109 1 130467972 to 130470225 2253 + unclassified gene predicted gene, 37109
Gm37283 1 130473743 to 130475313 1570 + unclassified gene predicted gene, 37283
Tssr8557 1 130478493 to 130478497 4 + TSS region transcription start site region 8557
D1Mit29 1 130498322 to 130498563 241 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 29
Tssr8558 1 130508889 to 130508893 4 + TSS region transcription start site region 8558
Gm16083 1 130515048 to 130557069 42021 + antisense lncRNA gene predicted gene 16083
Tssr8559 1 130551006 to 130551021 15 + TSS region transcription start site region 8559
Zp3r 1 130576713 to 130629621 52908 - protein coding gene zona pellucida 3 receptor
Gm23623 1 130595570 to 130595676 106 - snRNA gene predicted gene, 23623
Tssr13507 1 130629563 to 130629574 11 - TSS region transcription start site region 13507
Tssr199 1 130629578 to 130629581 3 - TSS region transcription start site region 199
Tssr13508 1 130629598 to 130629607 9 - TSS region transcription start site region 13508
Tssr13509 1 130629614 to 130629626 12 - TSS region transcription start site region 13509
C4bp 1 130635921 to 130661645 25724 - protein coding gene complement component 4 binding protein