Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:128246690-128587558

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ubxn4 1 128243964 to 128279378 35414 + protein coding gene UBX domain protein 4
Gm41949 1 128244559 to 128251119 6560 + lncRNA gene predicted gene, 41949
Tssr8531 1 128252195 to 128252218 23 + TSS region transcription start site region 8531
Tssr8532 1 128256181 to 128256203 22 + TSS region transcription start site region 8532
Tssr8533 1 128259439 to 128259468 29 + TSS region transcription start site region 8533
Tssr13439 1 128281016 to 128281020 4 - TSS region transcription start site region 13439
Lct 1 128284756 to 128328318 43562 - protein coding gene lactase
Tssr13440 1 128299505 to 128299524 19 - TSS region transcription start site region 13440
Tssr13441 1 128299589 to 128299634 45 - TSS region transcription start site region 13441
Tssr13442 1 128299953 to 128299987 34 - TSS region transcription start site region 13442
Tssr13443 1 128319098 to 128319114 16 - TSS region transcription start site region 13443
Tssr13444 1 128319220 to 128319238 18 - TSS region transcription start site region 13444
Tssr13445 1 128324323 to 128324327 4 - TSS region transcription start site region 13445
Tssr13446 1 128324497 to 128324502 5 - TSS region transcription start site region 13446
Tssr13447 1 128327749 to 128327755 6 - TSS region transcription start site region 13447
Tssr13448 1 128328311 to 128328326 15 - TSS region transcription start site region 13448
Mcm6 1 128331590 to 128359664 28074 - protein coding gene minichromosome maintenance complex component 6
Tssr13449 1 128343467 to 128343480 13 - TSS region transcription start site region 13449
Cpgi694 1 128359225 to 128359930 705 CpG island CpG island 694
Tssr13450 1 128359597 to 128359609 12 - TSS region transcription start site region 13450
Tssr13451 1 128359610 to 128359698 88 - TSS region transcription start site region 13451
Dars 1 128363707 to 128417368 53661 - protein coding gene aspartyl-tRNA synthetase
Tssr192 1 128373504 to 128373515 11 + TSS region transcription start site region 192
Tssr8534 1 128399359 to 128399383 24 + TSS region transcription start site region 8534
Tssr13452 1 128404573 to 128404577 4 - TSS region transcription start site region 13452
Tssr13453 1 128414023 to 128414028 5 - TSS region transcription start site region 13453
Cpgi695 1 128416690 to 128417558 868 CpG island CpG island 695
Tssr13454 1 128417221 to 128417230 9 - TSS region transcription start site region 13454
Tssr13455 1 128417235 to 128417246 11 - TSS region transcription start site region 13455
Tssr13456 1 128417272 to 128417283 11 - TSS region transcription start site region 13456
Tssr193 1 128417294 to 128417305 11 - TSS region transcription start site region 193
Tssr13457 1 128417316 to 128417350 34 - TSS region transcription start site region 13457
Tssr13458 1 128417352 to 128417384 32 - TSS region transcription start site region 13458
Tssr13459 1 128447272 to 128447284 12 - TSS region transcription start site region 13459
Cpgi696 1 128472492 to 128472668 176 CpG island CpG island 696
Gm23902 1 128490040 to 128490173 133 + snoRNA gene predicted gene, 23902
Gm29598 1 128493845 to 128494432 587 - pseudogene predicted gene 29598
Gm29597 1 128514810 to 128515117 307 - pseudogene predicted gene 29597
Gm25384 1 128515115 to 128515219 104 - snRNA gene predicted gene, 25384
Gm6170 1 128520073 to 128521460 1387 - pseudogene predicted gene 6170
Gm41950 1 128542355 to 128549406 7051 + lncRNA gene predicted gene, 41950
D1Mit99 1 128551085 to 128551281 196 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 99
D1Mit286 1 128551097 to 128551241 144 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 286
Tssr13460 1 128561618 to 128561621 3 - TSS region transcription start site region 13460
Tssr194 1 128570052 to 128570061 9 - TSS region transcription start site region 194
Tssr8535 1 128570564 to 128570607 43 + TSS region transcription start site region 8535
Tssr195 1 128586917 to 128586941 24 - TSS region transcription start site region 195