Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:127947591-128251470

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zranb3 1 127954184 to 128103047 148863 - protein coding gene zinc finger, RAN-binding domain containing 3
Gm28800 1 127961112 to 127965987 4875 + antisense lncRNA gene predicted gene 28800
Tssr13432 1 127976444 to 127976457 13 - TSS region transcription start site region 13432
Tssr13433 1 127976473 to 127976484 11 - TSS region transcription start site region 13433
Tssr13434 1 127976501 to 127976518 17 - TSS region transcription start site region 13434
Tssr8496 1 127978333 to 127978352 19 + TSS region transcription start site region 8496
Tssr8497 1 127978365 to 127978382 17 + TSS region transcription start site region 8497
Tssr8498 1 127978431 to 127978447 16 + TSS region transcription start site region 8498
Gm38248 1 127978905 to 127984687 5782 - unclassified gene predicted gene, 38248
Tssr8499 1 127985757 to 127985765 8 + TSS region transcription start site region 8499
Gm8283 1 128005489 to 128006453 964 - pseudogene predicted gene 8283
Tssr13435 1 128016153 to 128016189 36 - TSS region transcription start site region 13435
Tssr8500 1 128038522 to 128038525 3 + TSS region transcription start site region 8500
Rpl28-ps1 1 128038569 to 128038982 413 + pseudogene ribosomal protein L28, pseudogene 1
Tssr8501 1 128044480 to 128044487 7 + TSS region transcription start site region 8501
D1Mit393 1 128084233 to 128084377 144 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 393
Gm37625 1 128084460 to 128089331 4871 - unclassified gene predicted gene, 37625
Gm38026 1 128097591 to 128101470 3879 - unclassified gene predicted gene, 38026
Tssr13436 1 128102412 to 128102485 73 - TSS region transcription start site region 13436
Cpgi692 1 128102872 to 128104064 1192 CpG island CpG island 692
Tssr13437 1 128103016 to 128103053 37 - TSS region transcription start site region 13437
Tssr8502 1 128103297 to 128103311 14 + TSS region transcription start site region 8502
R3hdm1 1 128103301 to 128237736 134435 + protein coding gene R3H domain containing 1
Tssr8503 1 128103312 to 128103360 48 + TSS region transcription start site region 8503
Tssr8504 1 128103376 to 128103387 11 + TSS region transcription start site region 8504
Tssr8505 1 128104134 to 128104151 17 + TSS region transcription start site region 8505
Gm29383 1 128128410 to 128128889 479 - pseudogene predicted gene 29383
Tssr13438 1 128128914 to 128128927 13 - TSS region transcription start site region 13438
Gm37588 1 128132157 to 128134652 2495 + unclassified gene predicted gene, 37588
Tssr8506 1 128141917 to 128141933 16 + TSS region transcription start site region 8506
Tssr8507 1 128141940 to 128141968 28 + TSS region transcription start site region 8507
Tssr8508 1 128141973 to 128141990 17 + TSS region transcription start site region 8508
Tssr8509 1 128142863 to 128142871 8 + TSS region transcription start site region 8509
Tssr8510 1 128143353 to 128143359 6 + TSS region transcription start site region 8510
Gm37868 1 128143614 to 128146348 2734 + unclassified gene predicted gene, 37868
Tssr8511 1 128151232 to 128151279 47 + TSS region transcription start site region 8511
Tssr8512 1 128151806 to 128151834 28 + TSS region transcription start site region 8512
Tssr8513 1 128155631 to 128155633 2 + TSS region transcription start site region 8513
Gm37407 1 128163214 to 128164529 1315 + unclassified gene predicted gene, 37407
Tssr8514 1 128167929 to 128167941 12 + TSS region transcription start site region 8514
Tssr8515 1 128171652 to 128171657 5 + TSS region transcription start site region 8515
Tssr8516 1 128171788 to 128171820 32 + TSS region transcription start site region 8516
D1Ertd347e 1 128174508 to 128174754 246 DNA segment DNA segment, Chr 1, ERATO Doi 347, expressed
Tssr8517 1 128178918 to 128178932 14 + TSS region transcription start site region 8517
Tssr8518 1 128190388 to 128190403 15 + TSS region transcription start site region 8518
Tssr8519 1 128193730 to 128193733 3 + TSS region transcription start site region 8519
Tssr8520 1 128196990 to 128197006 16 + TSS region transcription start site region 8520
Tssr8521 1 128197672 to 128197676 4 + TSS region transcription start site region 8521
Mir128-1 1 128202361 to 128202430 69 + miRNA gene microRNA 128-1
Tssr8522 1 128202422 to 128202429 7 + TSS region transcription start site region 8522
Cpgi693 1 128243937 to 128244949 1012 CpG island CpG island 693
Ubxn4 1 128243964 to 128279378 35414 + protein coding gene UBX domain protein 4
Tssr8523 1 128244122 to 128244175 53 + TSS region transcription start site region 8523
Tssr8524 1 128244181 to 128244199 18 + TSS region transcription start site region 8524
Tssr8525 1 128244234 to 128244249 15 + TSS region transcription start site region 8525
Tssr8526 1 128244257 to 128244325 68 + TSS region transcription start site region 8526
Tssr8527 1 128244342 to 128244353 11 + TSS region transcription start site region 8527
Tssr8528 1 128244432 to 128244443 11 + TSS region transcription start site region 8528
Gm41949 1 128244559 to 128251119 6560 + lncRNA gene predicted gene, 41949
Tssr8529 1 128244584 to 128244593 9 + TSS region transcription start site region 8529
Tssr8530 1 128244756 to 128244761 5 + TSS region transcription start site region 8530