Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:127763784-127973807

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acmsd 1 127729413 to 127767564 38151 + protein coding gene amino carboxymuconate semialdehyde decarboxylase
2900009J06Rik 1 127753617 to 127774054 20437 - antisense lncRNA gene RIKEN cDNA 2900009J06 gene
Cpgi690 1 127773829 to 127774937 1108 CpG island CpG island 690
Ccnt2 1 127774164 to 127804837 30673 + protein coding gene cyclin T2
Tssr8489 1 127774183 to 127774238 55 + TSS region transcription start site region 8489
Tssr8490 1 127774241 to 127774272 31 + TSS region transcription start site region 8490
Tssr8491 1 127783584 to 127783594 10 + TSS region transcription start site region 8491
Tssr8492 1 127793479 to 127793481 2 + TSS region transcription start site region 8492
Tssr8493 1 127797522 to 127797527 5 + TSS region transcription start site region 8493
Map3k19 1 127815253 to 127855031 39778 - protein coding gene mitogen-activated protein kinase kinase kinase 19
D1Ertd57e 1 127851557 to 127851767 210 DNA segment DNA segment, Chr 1, ERATO Doi 57, expressed
Tssr13429 1 127854996 to 127855030 34 - TSS region transcription start site region 13429
Tssr13430 1 127859029 to 127859045 16 - TSS region transcription start site region 13430
Cpgi691 1 127868619 to 127869251 632 CpG island CpG island 691
Tssr8494 1 127868771 to 127868780 9 + TSS region transcription start site region 8494
Rab3gap1 1 127868773 to 127943868 75095 + protein coding gene RAB3 GTPase activating protein subunit 1
Tssr8495 1 127868784 to 127868807 23 + TSS region transcription start site region 8495
Tssr13431 1 127896964 to 127896969 5 - TSS region transcription start site region 13431
Zranb3 1 127954184 to 128103047 148863 - protein coding gene zinc finger, RAN-binding domain containing 3
Gm28800 1 127961112 to 127965987 4875 + antisense lncRNA gene predicted gene 28800