Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:106784441-107084464

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vps4b 1 106770788 to 106796725 25937 - protein coding gene vacuolar protein sorting 4B
Cpgi639 1 106796130 to 106796894 764 CpG island CpG island 639
Tssr13169 1 106796609 to 106796669 60 - TSS region transcription start site region 13169
Tssr13170 1 106796687 to 106796713 26 - TSS region transcription start site region 13170
Mleu1 1 106858782 to 106858782 0 QTL myeloid leukemia survival 1
Tssr8319 1 106860994 to 106861005 11 + TSS region transcription start site region 8319
Tssr8320 1 106861144 to 106861197 53 + TSS region transcription start site region 8320
Serpinb5 1 106861180 to 106883348 22168 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 5
Tssr8321 1 106861217 to 106861228 11 + TSS region transcription start site region 8321
Pou2f3-rs1 1 106887852 to 106888897 1045 - pseudogene POU domain, class 2, transcription factor 3, related sequence 1
Tssr8322 1 106934441 to 106934464 23 + TSS region transcription start site region 8322
Serpinb12 1 106934449 to 106957080 22631 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12
Tssr8323 1 106934480 to 106934494 14 + TSS region transcription start site region 8323
Tssr8324 1 106934502 to 106934524 22 + TSS region transcription start site region 8324
Tssr8325 1 106934530 to 106934540 10 + TSS region transcription start site region 8325
Tssr8326 1 106938953 to 106938958 5 + TSS region transcription start site region 8326
D1Mit259.2 1 106952585 to 106952732 147 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 259.2
D1Mit259 1 106952699 to 106952833 134 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 259
Tssr8327 1 106980979 to 106980985 6 + TSS region transcription start site region 8327
Serpinb13 1 106980984 to 107001195 20211 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 13
Tssr8328 1 106998588 to 106998601 13 + TSS region transcription start site region 8328
Rn4.5s-ps1 1 107004795 to 107005091 296 - pseudogene 4.5s RNA, pseudogene 1
Gm8080 1 107020137 to 107025325 5188 - pseudogene predicted gene 8080
Serpinb3a 1 107045587 to 107052303 6716 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3A
Tssr13171 1 107052331 to 107052345 14 - TSS region transcription start site region 13171
Serpinb3d 1 107078163 to 107083480 5317 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3D
Tssr13172 1 107084132 to 107084139 7 - TSS region transcription start site region 13172