Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:3987694-4187717

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi20036 8 3994140 to 3994576 436 CpG island CpG island 20036
Gm7389 8 3994626 to 3997506 2880 + pseudogene predicted gene 7389
Tssr76091 8 3995021 to 3995024 3 + TSS region transcription start site region 76091
Cpgi20037 8 3996633 to 3997103 470 CpG island CpG island 20037
Gm45048 8 4016454 to 4016882 428 - pseudogene predicted gene 45048
Gm7397 8 4018992 to 4021471 2479 + pseudogene predicted gene 7397
Gm45049 8 4034157 to 4034747 590 - pseudogene predicted gene 45049
Gm7407 8 4039857 to 4040421 564 - pseudogene predicted gene 7407
Tssr80238 8 4040490 to 4040508 18 - TSS region transcription start site region 80238
Tssr76092 8 4087217 to 4087226 9 + TSS region transcription start site region 76092
Cpgi20038 8 4087224 to 4087757 533 CpG island CpG island 20038
Tssr80239 8 4087380 to 4087437 57 - TSS region transcription start site region 80239
Tssr76093 8 4087445 to 4087454 9 + TSS region transcription start site region 76093
Tssr76094 8 4087463 to 4087525 62 + TSS region transcription start site region 76094
Tssr76095 8 4087528 to 4087551 23 + TSS region transcription start site region 76095
Tssr76096 8 4087559 to 4087570 11 + TSS region transcription start site region 76096
Gm16589 8 4087658 to 4088575 917 + pseudogene predicted gene 16589
Tssr76097 8 4087694 to 4087717 23 + TSS region transcription start site region 76097
Gm26750 8 4088149 to 4089166 1017 - lincRNA gene predicted gene, 26750
Tssr76098 8 4088192 to 4088211 19 + TSS region transcription start site region 76098
Tssr164692 8 4088400 to 4088422 22 + TSS region transcription start site region 164692
Cd209f 8 4102787 to 4105835 3048 - protein coding gene CD209f antigen
Tssr80240 8 4105758 to 4105767 9 - TSS region transcription start site region 80240
Gm23888 8 4115513 to 4115765 252 - unclassified non-coding RNA gene predicted gene, 23888
Cd209g 8 4134246 to 4137707 3461 + protein coding gene CD209g antigen
Tssr76099 8 4134718 to 4134725 7 + TSS region transcription start site region 76099
4932443L11Rik 8 4162372 to 4182115 19743 - antisense lncRNA gene RIKEN cDNA 4932443L11 gene
Cpgi20039 8 4166250 to 4167199 949 CpG island CpG island 20039
Evi5l 8 4166538 to 4208050 41512 + protein coding gene ecotropic viral integration site 5 like
Tssr76100 8 4166556 to 4166593 37 + TSS region transcription start site region 76100
Tssr76101 8 4172871 to 4172876 5 + TSS region transcription start site region 76101
Tssr76102 8 4181943 to 4181955 12 + TSS region transcription start site region 76102