MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:54287236-54387242

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Chn2	6	54039932 to 54301812	261880	+	protein coding gene	chimerin 2
Tssr61073	6	54292742 to 54292744	2	-	TSS region	transcription start site region 61073
Tssr56599	6	54292899 to 54292909	10	+	TSS region	transcription start site region 56599
Tssr56600	6	54293064 to 54293075	11	+	TSS region	transcription start site region 56600
Tssr56601	6	54300133 to 54300162	29	+	TSS region	transcription start site region 56601
Tssr56602	6	54314067 to 54314075	8	+	TSS region	transcription start site region 56602
9030405F24Rik	6	54325834 to 54328124	2290		unclassified gene	RIKEN cDNA 9030405F24 gene
Cpgi17458	6	54326667 to 54328027	1360		CpG island	CpG island 17458
Tssr56603	6	54326828 to 54326845	17	+	TSS region	transcription start site region 56603
Tssr56604	6	54326852 to 54326888	36	+	TSS region	transcription start site region 56604
Tssr56605	6	54326891 to 54326914	23	+	TSS region	transcription start site region 56605
Tssr56606	6	54326955 to 54326978	23	+	TSS region	transcription start site region 56606
Tssr56607	6	54326984 to 54326989	5	+	TSS region	transcription start site region 56607
Prr15	6	54327012 to 54330200	3188	+	protein coding gene	proline rich 15
Gm34169	6	54329638 to 54343436	13798	+	pseudogene	predicted gene, 34169
Tssr56608	6	54329838 to 54329843	5	+	TSS region	transcription start site region 56608
Tssr61074	6	54337236 to 54337242	6	-	TSS region	transcription start site region 61074
D6Mit185	6	54367571 to 54367715	144		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 185